BLASTP 2.0MP-WashU [04-May-2006] [macosx-10.4-i386-ILP32F64 2006-05-08T00:02:58] Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2006) http://blast.wustl.edu Query= Hoxa9 homeodomain protein Hox-A9 (270 letters) Database: swissprot 233,322 sequences; 87,558,080 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N sp|Q9PWD5|HXA9_MORSA Homeobox protein Hox-A9 1442 7.3e-148 1 sp|O42506|HXA9A_FUGRU Homeobox protein Hox-A9a (HoxA-9) 1248 2.6e-127 1 sp|Q9IA26|HXA9_HETFR Homeobox protein Hox-A9 702 1.9e-69 1 sp|P31269|HXA9_HUMAN Homeobox protein Hox-A9 (Hox-1G) 699 4.0e-69 1 sp|P09631|HXA9_MOUSE Homeobox protein Hox-A9 (Hox-1.7) 693 1.7e-68 1 sp|Q9YGT5|HXA9B_BRARE Homeobox protein Hox-A9b 624 3.5e-61 1 sp|Q9PWL6|HXA9A_BRARE Homeobox protein Hox-A9a (Hoxx9) 612 6.6e-60 1 sp|P31274|HXC9_HUMAN Homeobox protein Hox-C9 (Hox-3B) 612 6.6e-60 1 sp|P09633|HXC9_MOUSE Homeobox protein Hox-C9 (Hox-3.2) 612 6.6e-60 1 sp|P28357|HXD9_MOUSE Homeobox protein Hox-D9 (Hox-4.4) (H... 373 2.2e-58 3 sp|Q9PVQ9|HXC9_ORYLA Homeobox protein Hox-C9 590 1.4e-57 1 sp|P28356|HXD9_HUMAN Homeobox protein Hox-D9 (Hox-4C) (Ho... 359 7.3e-56 3 sp|Q9IA13|HXD9_HETFR Homeobox protein Hox-D9 573 8.9e-56 1 sp|O42502|HXC9A_FUGRU Homeobox protein Hox-C9a (FrHOXC-9) 572 1.1e-55 1 sp|Q9YGS6|HXC9A_BRARE Homeobox protein Hox-C9a (Hox-C9) 567 3.8e-55 1 sp|Q1KKS9|HXD9A_FUGRU Homeobox protein Hox-D9a 539 3.6e-52 1 sp|Q9PVR2|HXD9_ORYLA Homeobox protein Hox-D9 536 7.4e-52 1 sp|Q9PWM6|HXD9A_BRARE Homeobox protein Hox-D9a (Hox-D9) 526 8.5e-51 1 sp|Q98924|HXA9_CHICK Homeobox protein Hox-A9 522 2.3e-50 1 sp|Q1KKZ3|HXA9B_FUGRU Homeobox protein Hox-A9b 515 1.2e-49 1 sp|Q9PWM2|HXB9A_BRARE Homeobox protein Hox-B9a (Hox-B9) 445 3.3e-42 1 sp|P50209|HXA9_AMBME Homeobox protein Hox-A9 444 4.2e-42 1 sp|P20615|HXB9_MOUSE Homeobox protein Hox-B9 (Hox-2.5) 437 2.3e-41 1 sp|P17482|HXB9_HUMAN Homeobox protein Hox-B9 (Hox-2E) (Ho... 435 3.7e-41 1 sp|P51783|HXA9_CAVPO Homeobox protein Hox-A9 (Hox-1.7) 385 7.4e-36 1 sp|Q1KKY2|HXB9A_FUGRU Homeobox protein Hox-B9a 383 1.2e-35 1 sp|Q28601|HXC9_SHEEP Homeobox protein Hox-C9 372 1.8e-34 1 sp|P31272|HXB9_XENLA Homeobox protein Hox-B9 (XlHbox-6) 363 1.6e-33 1 sp|Q1KKZ4|HXAAB_FUGRU Homeobox protein Hox-A10b 312 1.3e-30 2 sp|Q1KKR7|HXD9B_FUGRU Homeobox protein Hox-D9b 320 5.7e-29 1 sp|Q1KKT0|HXDAA_FUGRU Homeobox protein Hox-D10a 315 1.9e-28 1 sp|P31258|HXA11_CHICK Homeobox protein Hox-A11 (Ghox-1I) ... 269 2.6e-28 2 sp|P31257|HXC10_MOUSE Homeobox protein Hox-C10 (Hox-3.6) 312 4.0e-28 1 sp|P28358|HXD10_HUMAN Homeobox protein Hox-D10 (Hox-4D) (... 312 4.0e-28 1 sp|Q9NYD6|HXC10_HUMAN Homeobox protein Hox-C10 312 4.0e-28 1 sp|P28359|HXD10_MOUSE Homeobox protein Hox-D10 (Hox-4.5) ... 309 8.4e-28 1 sp|P31260|HXA10_HUMAN Homeobox protein Hox-A10 (Hox-1H) (... 308 1.1e-27 1 sp|Q90469|HXDAA_BRARE Homeobox protein Hox-D10a (Hox-D10)... 308 1.1e-27 1 sp|P31310|HXA10_MOUSE Homeobox protein Hox-A10 (Hox-1.8) 305 2.2e-27 1 sp|Q9IA27|HXA10_HETFR Homeobox protein Hox-A10 303 3.6e-27 1 sp|Q9IA14|HXD10_HETFR Homeobox protein Hox-D10 302 4.6e-27 1 sp|P10179|HMB4_TRIGR Homeobox protein HB4 297 1.6e-26 1 sp|Q9PWL7|HXBAA_BRARE Homeobox protein Hox-B10a (Hox-B10) 295 2.6e-26 1 sp|P24341|HXD10_CHICK Homeobox protein Hox-D10 (Chox-4.5)... 295 2.6e-26 1 sp|Q8AWY2|HXAAB_BRARE Homeobox protein Hox-A10b (Hox-A10) 295 2.6e-26 1 sp|Q1KKV1|HXCAA_FUGRU Homeobox protein Hox-C10a 293 4.2e-26 1 sp|P24340|HXD9_CHICK Homeobox protein Hox-D9 (Chox-4.4) 288 1.4e-25 1 sp|Q1KL16|HXAAA_FUGRU Homeobox protein Hox-A10a 288 1.4e-25 1 sp|Q9PWD6|HXA10_MORSA Homeobox protein Hox-A10 287 1.8e-25 1 sp|Q1KL17|HXABA_FUGRU Homeobox protein Hox-A11a 249 3.6e-25 2 sp|Q9DDU0|HXABA_BRARE Homeobox protein Hox-A11a 258 7.3e-25 2 sp|Q1KKV2|HXCBA_FUGRU Homeobox protein Hox-C11a 249 1.2e-24 2 sp|Q58EL0|HXCBA_BRARE Homeobox protein Hox-C11a 244 8.1e-24 2 sp|Q9DDU1|HXABB_BRARE Homeobox protein Hox-A11b (Hox-A11) 269 1.5e-23 1 sp|Q9DDU2|HXABB_DANAE Homeobox protein Hox-A11b 268 1.9e-23 1 sp|P31270|HXA11_HUMAN Homeobox protein Hox-A11 (Hox-1I) 263 6.3e-23 1 sp|P31311|HXA11_MOUSE Homeobox protein Hox-A11 (Hox-1.9) 262 8.0e-23 1 sp|Q9IA15|HXD11_HETFR Homeobox protein Hox-D11 258 2.1e-22 1 sp|Q1KKT1|HXDBA_FUGRU Homeobox protein Hox-D11a 258 2.1e-22 1 sp|P31273|HXC8_HUMAN Homeobox protein Hox-C8 (Hox-3A) 233 3.0e-22 2 sp|P09025|HXC8_MOUSE Homeobox protein Hox-C8 (Hox-3.1) (M31) 233 3.0e-22 2 sp|Q9IA12|HXD8_HETFR Homeobox protein Hox-D8 218 3.0e-22 2 sp|P31277|HXD11_HUMAN Homeobox protein Hox-D11 (Hox-4F) 256 3.5e-22 1 sp|Q9YH13|HXC8_CHICK Homeobox protein Hox-C8 (cHoxc-8) 228 3.8e-22 2 sp|O13074|HXB4A_FUGRU Homeobox protein Hox-B4a (FrHOXB-4) 208 3.8e-22 2 sp|P23813|HXD11_MOUSE Homeobox protein Hox-D11 (Hox-4.6) ... 254 5.7e-22 1 sp|Q1KKZ5|HXABB_FUGRU Homeobox protein Hox-A11b 253 7.2e-22 1 sp|Q9PWD4|HXA7_MORSA Homeobox protein Hox-A7 214 7.8e-22 2 sp|P31263|HXD11_NOTVI Homeobox protein Hox-D11 (NvHox-2) 251 1.2e-21 1 sp|P70118|IPF1_MESAU Insulin promoter factor 1 (IPF-1) (H... 204 1.3e-21 2 sp|O43248|HXC11_HUMAN Homeobox protein Hox-C11 248 2.4e-21 1 sp|P24342|HXD11_CHICK Homeobox protein Hox-D11 (Chox-4.6)... 246 4.0e-21 1 sp|Q90470|HXDBA_BRARE Homeobox protein Hox-D11a (Hox-D11)... 246 4.0e-21 1 sp|P49639|HXA1_HUMAN Homeobox protein Hox-A1 (Hox-1F) 212 4.0e-21 2 sp|Q9IA23|HXA5_HETFR Homeobox protein Hox-A5 245 5.1e-21 1 sp|P09087|ABDB_DROME Homeobox protein abdominal-B (P3) (I... 229 5.2e-21 2 sp|Q24645|ANTP_DROSU Homeotic protein antennapedia 214 5.7e-21 2 sp|P31313|HXC11_MOUSE Homeobox protein Hox-C11 (Hox-3.7) 244 6.5e-21 1 sp|P13545|HMB1_STRPU Homeobox protein HB1 (SPHBOX1) 214 6.8e-21 2 sp|P17277|HXA4_CHICK Homeobox protein Hox-A4 (Chox-1.4) 209 6.8e-21 2 sp|P18864|HXB7_RAT Homeobox protein Hox-B7 (Homeobox prot... 243 8.3e-21 1 sp|Q6B3N0|HXA5_CHICK Homeobox protein Hox-A5 242 1.1e-20 1 sp|Q1KKX9|HXB5A_FUGRU Homeobox protein Hox-B5a 217 1.1e-20 2 sp|P09629|HXB7_HUMAN Homeobox protein Hox-B7 (Hox-2C) (HH... 241 1.4e-20 1 sp|Q9TT89|HXB7_BOVIN Homeobox protein Hox-B7 241 1.4e-20 1 sp|P52945|IPF1_HUMAN Insulin promoter factor 1 (IPF-1) (P... 204 1.4e-20 2 sp|P52947|IPF1_RAT Insulin promoter factor 1 (IPF-1) (Isl... 204 1.8e-20 2 sp|P32443|MEOX2_MOUSE Homeobox protein MOX-2 (Mesenchyme ... 239 2.2e-20 1 sp|P09080|HMB1_TRIGR Homeobox protein HB1 (TGHBOX1) 211 2.3e-20 2 sp|P14837|HM8_XENLA Homeobox protein 8 (XlHbox-8) 204 2.9e-20 2 sp|Q1KKY0|HXB6A_FUGRU Homeobox protein Hox-B6a 214 3.6e-20 2 sp|Q91771|HXB7A_XENLA Homeobox protein Hox-B7 A (XlHbox-2... 235 5.8e-20 1 sp|P09024|HXB7_MOUSE Homeobox protein Hox-B7 (Hox-2.3) (M... 235 5.8e-20 1 sp|Q8JH55|HXB8B_BRARE Homeobox protein Hox-B8b (Hox-A8) 234 7.5e-20 1 sp|P39020|MEOX2_RAT Homeobox protein MOX-2 (Growth arrest... 234 7.5e-20 1 sp|P07548|DFD_DROME Homeotic protein deformed 215 1.2e-19 2 sp|O42365|HXA2B_BRARE Homeobox protein Hox-A2b (Hox-A2) 210 1.2e-19 2 sp|P09021|HXA5_MOUSE Homeobox protein Hox-A5 (Hox-1.3) (M2) 232 1.2e-19 1 sp|Q68EH7|HXC8A_BRARE Homeobox protein Hox-C8a 232 1.2e-19 1 sp|Q2HJ67|HXA5_BOVIN Homeobox protein Hox-A5 232 1.2e-19 1 sp|P22574|HXB4A_BRARE Homeobox protein Hox-B4a (Hox-B4) (... 204 1.5e-19 2 sp|P09632|HXB8_MOUSE Homeobox protein Hox-B8 (Hox-2.4) 231 1.6e-19 1 sp|P17481|HXB8_HUMAN Homeobox protein Hox-B8 (Hox-2D) (Ho... 231 1.6e-19 1 sp|P10628|HXD4_MOUSE Homeobox protein Hox-D4 (Hox-4.2) (H... 231 1.6e-19 1 sp|P50222|MEOX2_HUMAN Homeobox protein MOX-2 (Mesenchyme ... 231 1.6e-19 1 sp|O57374|HXD4A_BRARE Homeobox protein Hox-D4a (Hox-D4) 202 2.0e-19 2 sp|P20719|HXA5_HUMAN Homeobox protein Hox-A5 (Hox-1C) 229 2.5e-19 1 sp|P15861|HXB6A_BRARE Homeobox protein Hox-B6a (Hox-B6) (... 228 3.2e-19 1 sp|Q1KKY1|HXB8A_FUGRU Homeobox protein Hox-B8a 228 3.2e-19 1 sp|Q8AWZ0|HXB8A_BRARE Homeobox protein Hox-B8a (Hox-B8) 227 4.1e-19 1 sp|P31267|HXA6_HUMAN Homeobox protein Hox-A6 (Hox-1B) 226 5.3e-19 1 sp|Q9YGT6|HXA5A_BRARE Homeobox protein Hox-A5a 225 6.7e-19 1 sp|P04476|HXB7B_XENLA Homeobox protein Hox-B7 B (XlHbox-2... 224 8.6e-19 1 sp|P52949|HXA5_RAT Homeobox protein Hox-A5 (Hox-1.3) 224 8.6e-19 1 sp|O42368|HXB3A_BRARE Homeobox protein Hox-B3a (Hox-B3) 207 9.4e-19 2 sp|Q1KL11|HXA2A_FUGRU Homeobox protein Hox-A2a 200 1.1e-18 2 sp|P31268|HXA7_HUMAN Homeobox protein Hox-A7 (Hox-1A) (Ho... 221 1.8e-18 1 sp|P81192|HXA4_LINSA Homeobox protein Hox-A4 (LsHox 4) 221 1.8e-18 1 sp|Q00444|HXC5_HUMAN Homeobox protein Hox-C5 (Hox-3D) (CP11) 221 1.8e-18 1 sp|Q9PWD3|HXA5_MORSA Homeobox protein Hox-A5 221 1.8e-18 1 sp|Q1KL14|HXA5A_FUGRU Homeobox protein Hox-A5a 221 1.8e-18 1 sp|Q1KKX7|HXB3A_FUGRU Homeobox protein Hox-B3a 208 1.8e-18 2 sp|Q07961|ABDA_TRICA Homeobox protein abdominal-A homolog 200 2.3e-18 2 sp|P09074|HXC5A_BRARE Homeobox protein Hox-C5a (Hox-C5) (... 220 2.3e-18 1 sp|Q9YGT4|HXB6B_BRARE Homeobox protein Hox-B6b (Hox-A7) 219 2.9e-18 1 sp|P09092|HXA6_MOUSE Homeobox protein Hox-A6 (Hox-1.2) (M... 219 2.9e-18 1 sp|P09079|HXB5_MOUSE Homeobox protein Hox-B5 (Hox-2.1) (M... 219 2.9e-18 1 sp|P23463|HXD8_MOUSE Homeobox protein Hox-D8 (Hox-4.3) (H... 218 3.7e-18 1 sp|P18866|HXC8_RAT Homeobox protein Hox-C8 (Homeobox prot... 218 3.7e-18 1 sp|P13378|HXD8_HUMAN Homeobox protein Hox-D8 (Hox-4E) (Ho... 218 3.7e-18 1 sp|P09016|HXD4_HUMAN Homeobox protein Hox-D4 (Hox-4B) (Ho... 218 3.7e-18 1 sp|Q08821|HXA1_XENLA Homeobox protein Hox-A1 (Hox.lab2) 194 4.4e-18 2 sp|Q00056|HXA4_HUMAN Homeobox protein Hox-A4 (Hox-1D) (Ho... 217 4.7e-18 1 sp|P39021|MEOX2_XENLA Homeobox protein MOX-2 217 4.7e-18 1 sp|P23459|HXD8_CHICK Homeobox protein Hox-D8 (Chox-M) 217 4.7e-18 1 sp|Q08624|HXC4_MOUSE Homeobox protein Hox-C4 (Hox-3.5) 217 4.7e-18 1 sp|P18863|HXB8_RAT Homeobox protein Hox-B8 (Homeobox prot... 217 4.7e-18 1 sp|Q9IA20|HXA2_HETFR Homeobox protein Hox-A2 200 5.9e-18 2 sp|P02830|HXA7_MOUSE Homeobox protein Hox-A7 (Hox-1.1) (M... 216 6.0e-18 1 sp|P02833|ANTP_DROME Homeotic protein antennapedia 219 7.0e-18 1 sp|P35452|HXD12_HUMAN Homeobox protein Hox-D12 (Hox-4H) 215 7.7e-18 1 sp|Q8AWY9|HXB7A_BRARE Homeobox protein Hox-B7a (Hox-B7) 215 7.7e-18 1 sp|P06798|HXA4_MOUSE Homeobox protein Hox-A4 (Hox-1.4) (H... 215 7.7e-18 1 sp|Q5YLH5|HXA6_CHICK Homeobox protein Hox-A6 215 7.7e-18 1 sp|Q1KKU6|HXC4A_FUGRU Homeobox protein Hox-C4a 215 7.7e-18 1 sp|P09071|HXA7_XENLA Homeobox protein Hox-A7 (XlHbox-3) (... 214 9.8e-18 1 sp|Q90VZ9|HXA7_CHICK Homeobox protein Hox-A7 214 9.8e-18 1 sp|P09017|HXC4_HUMAN Homeobox protein Hox-C4 (Hox-3E) (CP19) 214 9.8e-18 1 sp|P09014|HXB5A_BRARE Homeobox protein Hox-B5a (Hox-B5) (... 213 1.3e-17 1 sp|P24061|HXA7_COTJA Homeobox protein Hox-A7 (Quox-1) 213 1.3e-17 1 sp|Q9IA25|HXA7_HETFR Homeobox protein Hox-A7 213 1.3e-17 1 sp|P32043|HXC5_MOUSE Homeobox protein Hox-C5 (Hox-3.4) (H... 213 1.3e-17 1 sp|P31316|GSH2_MOUSE Homeobox protein GSH-2 180 1.3e-17 3 sp|P83949|UBX_DROME Homeotic protein ultrabithorax >sp|P8... 217 1.3e-17 1 sp|P09067|HXB5_HUMAN Homeobox protein Hox-B5 (Hox-2A) (HH... 212 1.6e-17 1 sp|Q9PVS4|HXC4_ORYLA Homeobox protein Hox-C4 212 1.6e-17 1 sp|P17278|HXD4_CHICK Homeobox protein Hox-D4 (Chox-A) 212 1.6e-17 1 sp|Q9PWD2|HXA4_MORSA Homeobox protein Hox-A4 211 2.0e-17 1 sp|P09022|HXA1_MOUSE Homeobox protein Hox-A1 (Hox-1.6) (H... 212 2.1e-17 1 sp|Q9PWM3|HXC4A_BRARE Homeobox protein Hox-C4a (Hox-C4) 210 2.6e-17 1 sp|P34684|LIN39_CAEEL Homeobox protein lin-39 (Abnormal c... 209 3.3e-17 1 sp|Q28600|HXA7_SHEEP Homeobox protein Hox-A7 209 3.3e-17 1 sp|P50208|HXA5_AMBME Homeobox protein Hox-A5 209 3.3e-17 1 sp|P09023|HXB6_MOUSE Homeobox protein Hox-B6 (Hox-2.2) (H... 209 3.3e-17 1 sp|P17509|HXB6_HUMAN Homeobox protein Hox-B6 (Hox-2B) (Ho... 209 3.3e-17 1 sp|Q1KL13|HXA4A_FUGRU Homeobox protein Hox-A4a 209 3.3e-17 1 sp|Q1KKX0|HXB5B_FUGRU Homeobox protein Hox-B5b 209 3.3e-17 1 sp|Q1KL12|HXA3A_FUGRU Homeobox protein Hox-A3a 214 3.7e-17 1 sp|Q9IA19|HXA1_HETFR Homeobox protein Hox-A1 209 4.2e-17 1 sp|P14839|HXB6_CHICK Homeobox protein Hox-B6 (GHOX-2.2) 208 4.2e-17 1 sp|Q9IA22|HXA4_HETFR Homeobox protein Hox-A4 208 4.2e-17 1 sp|Q1KKZ2|HXA2B_FUGRU Homeobox protein Hox-A2b 208 4.2e-17 1 sp|O08656|HXA1_RAT Homeobox protein Hox-A1 209 4.9e-17 1 sp|Q9IA11|HXD5_HETFR Homeobox protein Hox-D5 207 5.4e-17 1 sp|Q9IA24|HXA6_HETFR Homeobox protein Hox-A6 206 6.9e-17 1 sp|P09636|HMSA_SALSA Homeobox protein S12-A 206 6.9e-17 1 sp|P15859|SCR_APIME Homeobox protein H55 206 6.9e-17 1 sp|Q1KKX1|HXB6B_FUGRU Homeobox protein Hox-B6b 206 6.9e-17 1 sp|Q8AWZ2|HXA3A_BRARE Homeobox protein Hox-A3a 211 7.5e-17 1 sp|P09077|SCR_DROME Homeotic protein Sex combs reduced 211 8.0e-17 1 sp|P09013|HXB5B_BRARE Homeobox protein Hox-B5b (Hox-B5-li... 205 8.8e-17 1 sp|P14838|HXB5_CHICK Homeobox protein Hox-B5 (Ghox-2.1) 205 8.8e-17 1 sp|P09019|HXB5_XENLA Homeobox protein Hox-B5 (XlHbox-4) (... 205 8.8e-17 1 sp|P09070|HXB4_XENLA Homeobox protein Hox-B4 (Xhox-1A) 205 8.8e-17 1 sp|P50221|MEOX1_HUMAN Homeobox protein MOX-1 (Mesenchyme ... 205 8.8e-17 1 sp|Q9PWL5|HXA4A_BRARE Homeobox protein Hox-A4a (Zf-26) (H... 205 8.8e-17 1 sp|P23682|HXB3_CHICK Homeobox protein Hox-B3 (Chox-2.7) 210 8.9e-17 1 sp|O42503|HXC8A_FUGRU Homeobox protein Hox-C8a (FrHOXC-8) 209 1.1e-16 1 sp|P52946|IPF1_MOUSE Insulin promoter factor 1 (IPF-1) (I... 204 1.1e-16 1 sp|Q1KKW8|HXB1B_FUGRU Homeobox protein Hox-B1b 182 1.2e-16 2 sp|P10105|LAB_DROME Homeotic protein labial (F24) (F90-2) 198 1.2e-16 2 sp|Q9IA21|HXA3_HETFR Homeobox protein Hox-A3 209 1.3e-16 1 sp|Q05007|ABDA_ARTSF Homeobox protein abdominal-A homolog 203 1.4e-16 1 sp|P17483|HXB4_HUMAN Homeobox protein Hox-B4 (Hox-2F) (Ho... 203 1.4e-16 1 sp|P02832|HXC6_XENLA Homeobox protein Hox-C6 (XlHbox-1) (... 203 1.4e-16 1 sp|P15860|HM90_APIME Homeobox protein H90 203 1.4e-16 1 sp|P0C1T1|HXB2_MOUSE Homeobox protein Hox-B2 (Hox-2.8) 206 1.5e-16 1 sp|P31249|HXD3_HUMAN Homeobox protein Hox-D3 (Hox-4A) 208 1.7e-16 1 sp|P09027|HXD3_MOUSE Homeobox protein Hox-D3 (Hox-4.1) (H... 208 1.7e-16 1 sp|P14653|HXB1_HUMAN Homeobox protein Hox-B1 (Hox-2I) 202 1.8e-16 1 sp|P28174|HXC3A_BRARE Homeobox protein Hox-C3a (Hox-114) ... 202 1.8e-16 1 sp|Q1KKU7|HXC5A_FUGRU Homeobox protein Hox-C5a 202 1.8e-16 1 sp|Q1KKS7|HXD3A_FUGRU Homeobox protein Hox-D3a 207 2.1e-16 1 sp|P14652|HXB2_HUMAN Homeobox protein Hox-B2 (Hox-2H) (Ho... 205 2.1e-16 1 sp|O93353|HXD3_CHICK Homeobox protein Hox-D3 207 2.1e-16 1 sp|Q7T3J5|HXA3_CHICK Homeobox protein Hox-A3 207 2.1e-16 1 sp|O42367|HXB2A_BRARE Homeobox protein Hox-B2a (Hox-B2) 206 2.3e-16 1 sp|P10629|HXC6_MOUSE Homeobox protein Hox-C6 (Hox-3.3) (H... 201 2.3e-16 1 sp|P49925|HXC6_SHEEP Homeobox protein Hox-C6 201 2.3e-16 1 sp|P09634|HXA7_RAT Homeobox protein Hox-A7 (Hox-1.1) (Hom... 201 2.3e-16 1 sp|P17919|HXB1_MOUSE Homeobox protein Hox-B1 (Hox-2.9) 201 2.3e-16 1 sp|P09020|HXC5_XENLA Homeobox protein Hox-C5 (XlHbox-5) 201 2.3e-16 1 sp|P14651|HXB3_HUMAN Homeobox protein Hox-B3 (Hox-2G) (Ho... 207 2.4e-16 1 sp|P09026|HXB3_MOUSE Homeobox protein Hox-B3 (Hox-2.7) (H... 207 2.5e-16 1 sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 (Hox-1E) 207 2.6e-16 1 sp|P02831|HXA3_MOUSE Homeobox protein Hox-A3 (Hox-1.5) (M... 207 2.6e-16 1 sp|P50901|HOX3_BRAFL Homeobox protein HOX3 206 2.7e-16 1 sp|P10284|HXB4_MOUSE Homeobox protein Hox-B4 (Hox-2.6) 200 3.0e-16 1 sp|O14627|CDX4_HUMAN Homeobox protein CDX-4 (Caudal-type ... 200 3.0e-16 1 sp|P32442|MEOX1_MOUSE Homeobox protein MOX-1 (Mesenchyme ... 200 3.0e-16 1 sp|P29552|ABDA_AEDAE Homeobox protein abdominal-A homolog 200 3.0e-16 1 sp|P31261|HXA2_NOTVI Homeobox protein Hox-A2 (NvHbox-2.8) 200 3.0e-16 1 sp|Q26430|ABDA_MANSE Homeobox protein abdominal-A homolog 200 3.0e-16 1 sp|P14840|HXB4_CHICK Homeobox protein Hox-B4 (Chox-Z) 200 3.0e-16 1 sp|P29556|ABDA_SCHGR Homeobox protein abdominal-A homolog 200 3.0e-16 1 sp|O42504|HXC6A_FUGRU Homeobox protein Hox-C6a (FrHOXC-6) 200 3.0e-16 1 sp|Q6IEI0|HXB2A_FUGRU Homeobox protein Hox-B2a 205 3.6e-16 1 sp|Q9BZM3|GSH2_HUMAN Homeobox protein GSH-2 177 3.7e-16 3 sp|P31247|HXB3_XENLA Homeobox protein Hox-B3 (XlHox-2.7) 199 3.8e-16 1 sp|Q1KKS8|HXD4A_FUGRU Homeobox protein Hox-D4a 199 3.8e-16 1 sp|Q1KL10|HXA1A_FUGRU Homeobox protein Hox-A1a 200 4.8e-16 1 sp|P23812|HXD12_MOUSE Homeobox protein Hox-D12 (Hox-4.7) ... 198 4.9e-16 1 sp|P18867|HXD3_RAT Homeobox protein Hox-D3 (Homeobox prot... 198 4.9e-16 1 sp|P15862|HXC6A_BRARE Homeobox protein Hox-C6a (Hox-C6) (... 198 4.9e-16 1 sp|P21523|HLOX2_HIRME Homeobox protein LOX2 198 4.9e-16 1 sp|P31262|HXC5_NOTVI Homeobox protein Hox-C5 (NvHbox-3.4) 198 4.9e-16 1 sp|Q8K5B8|HXC12_MOUSE Homeobox protein Hox-C12 (Hox-3.8) 198 4.9e-16 1 sp|P09637|HXA5_SALSA Homeobox protein Hox-A5 (S12-B) 197 6.2e-16 1 sp|P15856|ABDA_APIME Homeobox protein abdominal-A homolog... 197 6.2e-16 1 sp|Q08727|HXA2_CHICK Homeobox protein Hox-A2 201 7.2e-16 1 sp|P31315|GSHI_MOUSE Homeobox protein GSH-1 183 7.8e-16 2 sp|Q5EU40|HXD12_CARPS Homeobox protein Hox-D12 196 7.9e-16 1 sp|P31245|HXA2_MOUSE Homeobox protein Hox-A2 (Hox-1.11) (... 200 9.0e-16 1 sp|P31246|HXA2_RAT Homeobox protein Hox-A2 (Hox-1.11) 200 9.0e-16 1 sp|O43364|HXA2_HUMAN Homeobox protein Hox-A2 200 9.3e-16 1 sp|Q8T940|UBX_JUNCO Homeotic protein ultrabithorax (JcUbx) 195 1.0e-15 1 sp|P24343|HXD12_CHICK Homeobox protein Hox-D12 (Chox-4.7)... 194 1.3e-15 1 sp|Q91622|CDX1_XENLA Homeobox protein CDX-1 (xCAD2) 194 1.3e-15 1 sp|Q1KKR6|HXD4B_FUGRU Homeobox protein Hox-D4b 194 1.3e-15 1 sp|Q90423|HXB1B_BRARE Homeobox protein Hox-B1b (Hox-A1) 197 1.5e-15 1 sp|Q1KKV3|HXCCA_FUGRU Homeobox protein Hox-C12a 195 1.5e-15 1 sp|P02835|FTZ_DROME Segmentation protein fushi tarazu 199 1.6e-15 1 sp|P14858|HXC6_NOTVI Homeobox protein Hox-C6 (NvHox-1) (F... 193 1.6e-15 1 sp|P09638|HXB2_SALSA Homeobox protein Hox-B2 (S6) 193 1.6e-15 1 sp|Q9H4S2|GSHI_HUMAN Homeobox protein GSH-1 182 1.8e-15 2 sp|P31357|HXB1_AMBME Homeobox protein Hox-B1 (AHox1) 192 2.1e-15 1 sp|Q01622|HLOX2_HELRO Homeobox protein LOX2 198 2.3e-15 1 sp|Q9PWM5|HXC6B_BRARE Homeobox protein Hox-C6b 191 2.7e-15 1 sp|Q28598|HXA4_SHEEP Homeobox protein Hox-A4 191 2.7e-15 1 sp|P48590|FTZ_DROHY Segmentation protein fushi tarazu 198 2.7e-15 1 sp|P29555|ABDA_DROME Homeobox protein abdominal-A 200 2.9e-15 1 sp|Q91907|GBX2_XENLA Homeobox protein GBX-2 (Gastrulation... 176 3.0e-15 2 sp|P10038|MAB5_CAEEL Homeobox protein mab-5 (Protein male... 190 3.4e-15 1 sp|P10178|HMB3_TRIGR Homeobox protein HB3 188 5.6e-15 1 sp|O42366|HXB1A_BRARE Homeobox protein Hox-B1a (Hox-B1) 195 7.0e-15 1 sp|P09090|ZEN2_DROME Protein zerknuellt 2 (ZEN-2) 187 7.1e-15 1 sp|Q9YGT0|HXCCB_BRARE Homeobox protein Hox-C12b 193 8.3e-15 1 sp|Q90471|HXDCA_BRARE Homeobox protein Hox-D12a (Hox-D12) 189 8.5e-15 1 sp|Q98SI1|HXA1A_BRARE Homeobox protein Hox-A1a (Hox-A1) 185 1.2e-14 2 sp|Q1KKZ6|HXADB_FUGRU Homeobox protein Hox-A13b 192 1.4e-14 1 sp|P17488|HM13_CAEEL Homeobox protein ceh-13 184 1.5e-14 1 sp|P18865|HXC4_RAT Homeobox protein Hox-C4 (Homeobox prot... 184 1.5e-14 1 sp|Q1KKT2|HXDCA_FUGRU Homeobox protein Hox-D12a 188 1.5e-14 1 sp|Q9IA16|HXD12_HETFR Homeobox protein Hox-D12 190 1.7e-14 1 sp|P17138|HMA2_HELTR Homeobox protein HTR-A2 183 1.9e-14 1 sp|P31275|HXC12_HUMAN Homeobox protein Hox-C12 (Hox-3F) 191 2.0e-14 1 sp|Q9QZW9|HLXB9_MOUSE Homeobox protein HB9 195 2.1e-14 1 sp|P81193|CDX_LINSA Homeobox protein CDX (Caudal-type hom... 182 2.4e-14 1 sp|P50210|HXA13_AMBME Homeobox protein Hox-A13 182 2.4e-14 1 sp|Q26600|SMOX1_SCHMA Homeobox protein SMOX-1 190 2.7e-14 1 sp|P79724|HXADB_BRARE Homeobox protein Hox-A13b (Hox-A13) 183 3.5e-14 2 sp|Q1ECY2|HXBDA_BRARE Homeobox protein Hox-B13a 191 3.9e-14 1 sp|P47902|CDX1_HUMAN Homeobox protein CDX-1 (Caudal-type ... 178 4.2e-14 2 sp|P31259|HXB1_CHICK Homeobox protein Hox-B1 (Ghox-lab) 190 6.3e-14 1 sp|Q05095|CDX1_RAT Homeobox protein CDX-1 (Caudal-type ho... 178 6.4e-14 1 sp|Q28599|HXA5_SHEEP Homeobox protein Hox-A5 178 6.4e-14 1 sp|Q90346|HXB1_CYPCA Homeobox protein Hox-B1 190 7.0e-14 1 sp|Q07424|CDX4_MOUSE Homeobox protein CDX-4 (Caudal-type ... 187 9.6e-14 1 sp|Q1KKY3|HXBDA_FUGRU Homeobox protein Hox-B13a 189 1.1e-13 1 sp|P46692|HMD1_CHICK Homeobox protein CHOX-CAD 180 1.2e-13 1 sp|P50219|HLXB9_HUMAN Homeobox protein HB9 191 1.3e-13 1 sp|Q1KL22|HXADA_FUGRU Homeobox protein Hox-A13a 180 1.8e-13 2 sp|Q5EU41|HXD13_CARPS Homeobox protein Hox-D13 174 1.9e-13 2 sp|P31264|HMPB_DROME Homeotic protein proboscipedia 193 2.1e-13 1 sp|P17487|HM12_CAEEL Homeobox protein ceh-12 173 2.3e-13 1 sp|Q90X89|CDX1_XENTR Homeobox protein CDX-1 182 2.5e-13 1 sp|Q62424|HXA13_MOUSE Homeobox protein Hox-A13 (Hox-1.10) 182 2.9e-13 2 sp|P31271|HXA13_HUMAN Homeobox protein Hox-A13 (Hox-1J) 182 3.0e-13 2 sp|Q98SH9|HXC1A_BRARE Homeobox protein Hox-C1a 185 3.4e-13 1 sp|P13544|HM1_CHICK Homeobox protein CHOX-1 171 4.0e-13 1 sp|Q6JIY4|HXCDB_BRARE Homeobox protein Hox-C13b 182 4.3e-13 1 sp|Q9DEB6|CDX1_CHICK Homeobox protein CDX-1 (Caudal-type ... 180 4.9e-13 1 sp|Q6JIY5|HXCDA_BRARE Homeobox protein Hox-C13a 184 5.0e-13 1 sp|Q1KKV4|HXCDA_FUGRU Homeobox protein Hox-C13a 184 5.0e-13 1 sp|Q9GZZ0|HXD1_HUMAN Homeobox protein Hox-D1 185 5.1e-13 1 sp|Q1KKX5|HXB1A_FUGRU Homeobox protein Hox-B1a 186 6.4e-13 1 sp|P34766|PAL1_CAEEL Homeobox protein pal-1 (Homeobox pro... 169 6.9e-13 1 sp|P09078|HXB8_PIG Homeobox protein Hox-B8 (Hox-2.4) 169 6.9e-13 1 sp|Q90X25|HXA13_CHICK Homeobox protein Hox-A13 182 7.2e-13 1 sp|Q24648|ZEN_DROSU Protein zerknuellt 177 7.3e-13 2 sp|Q99626|CDX2_HUMAN Homeobox protein CDX-2 (Caudal-type ... 183 7.6e-13 1 sp|Q9IA17|HXD13_HETFR Homeobox protein Hox-D13 181 8.4e-13 1 sp|P70321|HXB13_MOUSE Homeobox protein Hox-B13 172 8.8e-13 2 sp|Q08820|HXD1_XENLA Homeobox protein Hox-D1 (Hox.lab1) 182 8.8e-13 1 sp|P43241|CDX2_MOUSE Homeobox protein CDX-2 (Caudal-type ... 175 1.1e-12 2 sp|Q04649|CDX2_MESAU Homeobox protein CDX-2 (Caudal-type ... 182 1.1e-12 1 sp|P70217|HXD13_MOUSE Homeobox protein Hox-D13 (Hox-4.8) 174 1.2e-12 2 sp|P18111|CDX1_MOUSE Homeobox protein CDX-1 (Caudal-type ... 178 1.4e-12 1 sp|Q6W990|HXADA_BRARE Homeobox protein Hox-A13a 180 2.0e-12 1 sp|O15522|NKX28_HUMAN Homeobox protein Nkx-2.8 (Homeobox ... 155 2.3e-12 2 sp|Q01822|HXD1_MOUSE Homeobox protein Hox-D1 (Hox-4.9) 179 3.4e-12 1 sp|P50207|HXC13_MOUSE Homeobox protein Hox-C13 179 3.5e-12 1 sp|P31276|HXC13_HUMAN Homeobox protein Hox-C13 (Hox-3G) 179 3.5e-12 1 sp|Q04281|HOX71_XENLA Homeobox protein XHOX-7.1 177 4.0e-12 1 sp|P52951|GBX2_HUMAN Homeobox protein GBX-2 (Gastrulation... 179 4.3e-12 1 sp|P09089|ZEN1_DROME Protein zerknuellt 1 (ZEN-1) 173 5.3e-12 2 sp|P56407|HM09_CAEEL Homeobox protein ceh-9 161 6.2e-12 1 sp|P70354|MSX3_MOUSE Homeobox protein MSX-3 159 1.1e-11 1 sp|P24344|HXD13_CHICK Homeobox protein Hox-D13 (Chox-4.8)... 174 1.1e-11 1 sp|Q9W7E8|KOZA_XENLA Homeobox protein koza (Homeodomain t... 158 1.4e-11 1 sp|Q92826|HXB13_HUMAN Homeobox protein Hox-B13 172 1.5e-11 1 sp|P35453|HXD13_HUMAN Homeobox protein Hox-D13 (Hox-4I) 174 1.7e-11 1 sp|Q90472|HXDDA_BRARE Homeobox protein Hox-D13a (Hox-D13) 169 1.8e-11 1 sp|P15142|HM7X_CHICK Homeobox protein CHOX-7 157 1.8e-11 1 sp|P40764|DLX2_MOUSE Homeobox protein DLX-2 (Homeobox pro... 173 2.2e-11 1 sp|Q02814|HMD2_CHICK Homeobox protein CHOX-CAD2 156 2.4e-11 1 sp|P48031|GBX2_MOUSE Homeobox protein GBX-2 (Gastrulation... 172 3.4e-11 1 sp|P10181|ROUGH_DROME Homeobox protein rough 161 3.5e-11 2 sp|P15857|HM17_APIME Homeobox protein H17 154 4.1e-11 1 sp|P22711|TIN_DROME Muscle-specific homeobox protein tinm... 141 4.3e-11 2 sp|P09085|CAD_DROME Homeotic protein caudal 173 4.4e-11 1 sp|Q9GK08|MSX2_CANFA Homeobox protein MSX-2 (Hox-8) 166 6.5e-11 1 sp|P42587|HNK2_XENLA Homeobox protein XENK-2 152 6.9e-11 1 sp|P09635|HXA4_RAT Homeobox protein Hox-A4 (Homeobox prot... 152 6.9e-11 1 sp|Q14774|HLX1_HUMAN Homeobox protein HLX1 (Homeobox prot... 130 7.1e-11 2 sp|P52953|MSX2_RAT Homeobox protein MSX-2 (Hox-8.1) 151 9.1e-11 1 sp|P50577|DLX5_CHICK Homeobox protein DLX-5 (cDlx) 166 9.5e-11 1 sp|O42230|GBX2_CHICK Homeobox protein GBX-2 (Gastrulation... 167 1.4e-10 1 sp|P50576|DLX5A_BRARE Homeobox protein Dlx5a (DLX-4) (Dis... 164 1.7e-10 1 sp|P35548|MSX2_HUMAN Homeobox protein MSX-2 (Hox-8) 163 1.7e-10 1 sp|P23410|MSX2_COTJA Homeobox protein MSX-2 (MSX-1) (QUOX-7) 162 1.9e-10 1 sp|P23397|HMEN_HELTR Homeobox protein Ht-En 148 2.0e-10 1 sp|Q90481|NX22A_BRARE Homeobox protein Nkx-2.2a (Homeobox... 162 2.3e-10 1 sp|P28362|MSX2_CHICK Homeobox protein MSX-2 (CHOX-8) (GHo... 161 2.5e-10 1 sp|Q1KKR8|HXDBB_FUGRU Homeobox protein Hox-D11b 161 2.5e-10 1 sp|Q26603|SMOX4_SCHMA Homeobox protein SMOX-4 147 2.6e-10 1 sp|P09076|HME30_APIME Homeobox protein E30 146 3.4e-10 1 sp|Q07687|DLX2_HUMAN Homeobox protein DLX-2 162 5.1e-10 1 sp|O70584|NKX28_MOUSE Homeobox protein Nkx-2.8 (Homeobox ... 156 5.5e-10 1 sp|P14150|HMEN_SCHAM Segmentation polarity homeobox prote... 144 5.7e-10 1 sp|P34326|HM16_CAEEL Homeobox protein engrailed-like ceh-16 144 5.7e-10 1 sp|P82976|GBX1_MOUSE Homeobox protein GBX-1 (Gastrulation... 163 7.2e-10 1 sp|Q9EQM3|NKX24_MOUSE Homeobox protein Nkx-2.4 (Homeobox ... 161 8.4e-10 1 sp|Q09604|VAB15_CAEEL Homeobox protein vab-15 (Variable a... 153 9.0e-10 1 sp|Q9BZE3|BARH1_HUMAN BarH-like 1 homeobox protein 157 9.2e-10 2 sp|P63156|BARH1_RAT BarH-like 1 homeobox protein (Bar-cla... 155 1.0e-09 2 sp|Q64317|DLX1_MOUSE Homeobox protein DLX-1 156 1.0e-09 1 sp|P56177|DLX1_HUMAN Homeobox protein DLX-1 156 1.0e-09 1 sp|Q14549|GBX1_HUMAN Homeobox protein GBX-1 (Gastrulation... 160 1.2e-09 1 sp|P42581|HMX3_MOUSE Homeobox protein HMX3 (Homeobox prot... 152 1.2e-09 2 sp|P31533|HME2B_BRARE Homeobox protein engrailed-2b (Zf-E... 140 1.3e-09 3 sp|Q03358|MSX2_MOUSE Homeobox protein MSX-2 (Hox-8.1) 156 1.3e-09 1 sp|P50575|DLX5_RAT Homeobox protein DLX-5 (DLX-3) (RDLX) 157 1.4e-09 1 sp|Q00400|DTH1_DUGTI Homeobox protein DTH-1 162 1.5e-09 1 sp|P09075|HME60_APIME Homeobox protein E60 140 1.6e-09 1 sp|P97273|TITF1_CAVPO Thyroid transcription factor 1 (Thy... 140 1.6e-09 1 sp|P70396|DLX5_MOUSE Homeobox protein DLX-5 156 1.8e-09 1 sp|P50476|HOX3_XENLA Homeobox protein XHOX-3 159 1.8e-09 1 sp|P53772|DLLH_BRAFL Homeobox protein DLL homolog 157 2.0e-09 1 sp|P31538|HME1B_XENLA Homeobox protein engrailed-1-B (En-1B) 139 2.1e-09 1 sp|P18264|ROUGH_DROVI Homeobox protein rough 157 2.3e-09 1 sp|P56178|DLX5_HUMAN Homeobox protein DLX-5 155 2.4e-09 1 sp|Q01704|MSXD_BRARE Homeobox protein MSH-D 150 2.6e-09 1 sp|Q03357|MSXA_BRARE Homeobox protein MSH-A 153 2.6e-09 1 sp|Q03356|MSXB_BRARE Homeobox protein MSH-B 153 2.6e-09 1 sp|O02786|MSX1_BOVIN Homeobox protein MSX-1 (Msh homeobox... 155 2.7e-09 1 sp|Q9NLC2|HM24_CAEEL Homeobox protein ceh-24 155 2.7e-09 1 sp|P09015|HME2A_BRARE Homeobox protein engrailed-2a (Zf-E... 141 3.0e-09 2 sp|P09066|HME2_MOUSE Homeobox protein engrailed-2 (Mo-En-2) 142 3.2e-09 3 sp|Q98876|DLX2B_BRARE Homeobox protein Dlx2b (DLX-5) (Dis... 153 3.6e-09 1 sp|P49749|EVX2_MOUSE Homeobox even-skipped homolog protei... 158 3.6e-09 1 sp|Q03828|EVX2_HUMAN Homeobox even-skipped homolog protei... 158 3.6e-09 1 sp|Q0P4H6|LBX1_XENTR Transcription factor LBX1 (Ladybird ... 152 4.0e-09 1 sp|Q2PYN8|LBX1_XENLA Transcription factor LBX1 (Ladybird ... 152 4.1e-09 1 sp|Q9H2Z4|NKX24_HUMAN Homeobox protein Nkx-2.4 (Homeobox ... 155 4.4e-09 1 sp|P35993|HOX7P_XENLA Homeobox protein XHOX-7.1' 153 4.4e-09 1 sp|P42584|LOX10_HELTR Homeobox protein LOX10 136 4.6e-09 1 sp|P52954|LBX1_HUMAN Transcription factor LBX1 (Ladybird ... 152 5.1e-09 1 sp|P52955|LBX1_MOUSE Transcription factor LBX1 (Ladybird ... 152 5.2e-09 1 sp|Q1XID0|LBX1_RAT Transcription factor LBX1 (Ladybird ho... 152 5.4e-09 1 sp|Q64205|DLX3_MOUSE Homeobox protein DLX-3 152 5.5e-09 1 sp|P13297|MSX1_MOUSE Homeobox protein MSX-1 (Msh homeobox... 152 5.9e-09 1 sp|P31535|HMENA_MYXGL Homeobox protein engrailed-like A (... 135 6.0e-09 1 sp|P15858|EMS_APIME Homeobox protein H40 135 6.0e-09 1 sp|P49640|EVX1_HUMAN Homeobox even-skipped homolog protei... 155 6.1e-09 1 sp|Q01703|MSXC_BRARE Homeobox protein MSH-C 151 6.2e-09 1 sp|P28360|MSX1_HUMAN Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL87|MSX1_MACMU Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL76|MSX1_PROVC Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL83|MSX1_LEORO Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL86|MSX1_SAIBB Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL84|MSX1_CALJA Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL77|MSX1_LEPED Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL78|MSX1_LEMCA Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL85|MSX1_CALGO Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL82|MSX1_SAGOE Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL79|MSX1_DAUMA Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|Q2VL80|MSX1_PERPO Homeobox protein MSX-1 (Msh homeobox... 152 6.2e-09 1 sp|P23683|EVX1_MOUSE Homeobox even-skipped homolog protei... 155 6.4e-09 1 sp|Q9NY43|BARH2_HUMAN BarH-like 2 homeobox protein 138 7.0e-09 2 sp|P28361|MSX1_CHICK Homeobox protein MSX-1 (Msh homeobox... 149 7.3e-09 1 sp|P09532|HMEN_TRIGR Homeobox protein engrailed (SU-HB-En) 134 7.8e-09 1 sp|O97670|HESX1_RABIT Homeobox expressed in ES cells 1 (H... 134 7.8e-09 1 sp|P42582|NKX25_MOUSE Homeobox protein Nkx-2.5 (Homeobox ... 138 7.9e-09 2 sp|Q00401|HMH2_DUGTI Homeobox protein DTH-2 149 8.3e-09 2 sp|P26797|HM19_CAEEL Homeobox protein ceh-19 141 8.7e-09 1 sp|P06602|EVE_DROME Segmentation protein even-skipped 153 8.9e-09 1 sp|Q05917|HME2_CHICK Homeobox protein engrailed-2 (Gg-En-2) 142 9.8e-09 2 sp|P50223|HMGX7_CHICK Homeobox protein GHOX-7 (CHOX-7) (H... 150 9.9e-09 1 sp|P52730|HME2B_XENLA Homeobox protein engrailed-2-B (En-... 144 9.9e-09 2 sp|Q9UIW0|VAX2_HUMAN Ventral anterior homeobox 2 150 1.0e-08 1 sp|O08686|BARX2_MOUSE Homeobox protein BarH-like 2 146 1.0e-08 1 sp|Q9IA18|EVX2_HETFR Homeobox even-skipped homolog protei... 153 1.1e-08 1 sp|Q05916|HME1_CHICK Homeobox protein engrailed-1 (Gg-En-1) 151 1.2e-08 1 sp|P17486|EGL5_CAEEL Homeobox protein egl-5 (Homeobox pro... 135 1.2e-08 2 sp|Q804S6|EMX1_BRARE Homeobox protein EMX1 (Empty spiracl... 130 1.2e-08 2 sp|Q4JM65|NANOG_BOVIN Homeobox protein NANOG (Homeobox tr... 149 1.5e-08 1 sp|P56179|DLX6_HUMAN Homeobox protein DLX-6 131 1.7e-08 1 sp|P53547|HM01_CAEEL Homeobox protein ceh-1 131 1.7e-08 1 sp|P42585|HBX3_ECHGR Homeobox protein EgHBX3 131 1.7e-08 1 sp|P70397|DLX6_MOUSE Homeobox protein DLX-6 131 1.7e-08 1 sp|O88181|BARH2_RAT BarH-like 2 homeobox protein (Bar-cla... 138 1.8e-08 2 sp|P52729|HME2A_XENLA Homeobox protein engrailed-2-A (En-... 142 1.9e-08 2 sp|O17319|HM24_CAEBR Homeobox protein ceh-24 148 1.9e-08 1 sp|P20270|HM07_CAEEL Homeobox protein ceh-7 130 2.2e-08 1 sp|P54655|DLL3_XENLA Homeobox protein DLL-3 (XDLL-3) 147 2.3e-08 1 sp|Q8VIB5|BARH2_MOUSE BarH-like 2 homeobox protein (Bar-c... 136 2.5e-08 2 sp|O43763|TLX2_HUMAN T-cell leukemia homeobox protein 2 (... 146 2.9e-08 1 sp|P70436|DLX4_MOUSE Homeobox protein DLX-4 (DLX-7) 132 3.0e-08 2 sp|O60479|DLX3_HUMAN Homeobox protein DLX-3 146 3.0e-08 1 sp|Q92988|DLX4_HUMAN Homeobox protein DLX-4 (DLX-7) (DLX-... 143 3.4e-08 1 sp|P53774|DLL2_XENLA Homeobox protein DLL-2 (XDLL-2) 145 3.5e-08 1 sp|O42370|HXD3A_BRARE Homeobox protein Hox-D3a (Hox-D3) 128 3.7e-08 1 sp|Q04896|HME1A_BRARE Homeobox protein engrailed-1a (Eng1) 142 3.7e-08 1 sp|Q9IAX9|VAX2B_XENLA Ventral anterior homeobox 2b (Ventr... 145 4.3e-08 1 sp|P42586|NKX22_MOUSE Homeobox protein Nkx-2.2 (Homeobox ... 144 4.4e-08 1 sp|O95096|NKX22_HUMAN Homeobox protein Nkx-2.2 (Homeobox ... 144 4.4e-08 1 sp|P43697|NKX22_MESAU Homeobox protein Nkx-2.2 (Homeobox ... 144 4.4e-08 1 sp|P43699|TITF1_HUMAN Thyroid transcription factor 1 (Thy... 147 4.4e-08 1 sp|P43698|TITF1_CANFA Thyroid transcription factor 1 (Thy... 147 4.4e-08 1 sp|P23441|TITF1_RAT Thyroid transcription factor 1 (Thyro... 147 4.5e-08 1 sp|P50220|TITF1_MOUSE Thyroid transcription factor 1 (Thy... 147 4.5e-08 1 sp|Q9PU20|VAX2A_XENLA Ventral anterior homeobox 2a (Xvax2) 145 4.6e-08 1 sp|P31534|HMEN_LAMPL Homeobox protein engrailed-like (EN) 127 4.7e-08 1 sp|P31537|HME1A_XENLA Homeobox protein engrailed-1-A (En-1A) 127 4.7e-08 1 sp|P53771|BOX5_NOTVI Homeobox protein box-5 (NVHBOX-5) 143 4.8e-08 1 sp|Q03372|HMSH_DROME Muscle segmentation homeobox (Protei... 149 4.8e-08 1 sp|Q01702|DLX3B_BRARE Homeobox protein Dlx3b (DLX-3) (Dis... 143 5.6e-08 1 sp|P53770|DLX3_NOTVI Homeobox protein DLX-3 (Box-4) (NVHB... 143 5.9e-08 1 sp|Q91284|DLX3_PLEWA Distal-less-like protein DLX-3 143 6.0e-08 1 sp|Q6R3Q6|BSH_BRARE Brain-specific homeobox protein homolog 140 6.1e-08 1 sp|P22808|VND_DROME Homeobox protein vnd (Protein ventral... 150 6.1e-08 1 sp|P22809|BAGP_DROME Homeobox protein bagpipe (NK-3) 146 6.3e-08 1 sp|Q90229|DLX3_AMBME Homeobox protein DLX-3 143 6.4e-08 1 sp|P41936|HM22_CAEEL Homeobox protein ceh-22 145 6.6e-08 1 sp|P19622|HME2_HUMAN Homeobox protein engrailed-2 (Hu-En-2) 142 6.8e-08 2 sp|P09065|HME1_MOUSE Homeobox protein engrailed-1 (Mo-En-1) 146 6.9e-08 1 sp|P52952|NKX25_HUMAN Homeobox protein Nkx-2.5 (Homeobox ... 144 7.3e-08 1 sp|Q11101|YL15_CAEEL Uncharacterized homeobox protein C02... 141 7.5e-08 1 sp|Q9UMQ3|BARX2_HUMAN Homeobox protein BarH-like 2 141 7.7e-08 1 sp|O93590|ZAX_XENLA Homeobox protein zampogna (Xzax) 138 9.8e-08 1 sp|Q04787|BSH_DROME Brain-specific homeobox protein 145 1.0e-07 1 sp|P31536|HMENB_MYXGL Homeobox protein engrailed-like B (... 124 1.0e-07 1 sp|P20269|HM05_CAEEL Homeobox protein ceh-5 124 1.0e-07 1 sp|P23681|HXB8_CHICK Homeobox protein Hox-B8 (Chox-2.4) 124 1.0e-07 1 sp|P79775|ANF1_CHICK Homeobox protein ANF-1 (GANF) 134 1.1e-07 1 sp|P53775|DLL4_XENLA Homeobox protein DLL-4 (XDLL-4) 141 1.2e-07 1 sp|Q9DDB0|VAX1B_XENLA Ventral anterior homeobox 1b 141 1.2e-07 1 sp|Q99801|NKX31_HUMAN Homeobox protein Nkx-3.1 138 1.3e-07 1 sp|P97436|NKX31_MOUSE Homeobox protein Nkx-3.1 138 1.3e-07 1 sp|Q24255|BARH1_DROME Homeobox protein B-H1 (Homeobox pro... 145 1.5e-07 1 sp|Q810B3|BSH_MOUSE Brain-specific homeobox protein homolog 137 1.6e-07 1 sp|Q6RFL5|BSH_CHICK Brain-specific homeobox protein homolog 137 1.7e-07 1 sp|Q9PVN2|VAX1_CHICK Ventral anterior homeobox 1 141 1.7e-07 1 sp|Q90788|NKX25_CHICK Homeobox protein Nkx-2.5 (Homeobox ... 140 1.7e-07 1 sp|Q9N0M2|BARX2_SHEEP Homeobox protein BarH-like 2 122 1.7e-07 1 sp|P42580|NKX12_MOUSE NK1 transcription factor-related pr... 140 1.9e-07 1 sp|Q05640|HMEN_ARTSF Homeobox protein engrailed 141 2.0e-07 1 sp|Q98877|DLX6A_BRARE Homeobox protein Dlx6a (DLX-6) (Dis... 130 2.1e-07 2 sp|P50574|DLX2A_BRARE Homeobox protein Dlx2a (DLX-2) (Dis... 138 2.2e-07 1 WARNING: Descriptions of 469 database sequences were not reported due to the limiting value of parameter V = 500. NOTE: You might consider using a low-complexity sequence filter to reduce the number of spurious matches that may be appearing in the output. See the filter and wordmask options at http://blast.wustl.edu/blast/parameters.html#filter. >sp|Q9PWD5|HXA9_MORSA Homeobox protein Hox-A9 Length = 269 Score = 1442 (512.7 bits), Expect = 7.3e-148, P = 7.3e-148 Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV Sbjct: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTH 120 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTH Sbjct: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTH 120 Query: 121 HYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKP 180 HYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKP Sbjct: 121 HYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKP 180 Query: 181 GLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLN 240 GLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLN Sbjct: 181 GLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLN 240 Query: 241 LTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 LTERQVKIWFQNRRMKMKKFNKDGAPKDE Sbjct: 241 LTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 >sp|O42506|HXA9A_FUGRU Homeobox protein Hox-A9a (HoxA-9) Length = 283 Score = 1248 (444.4 bits), Expect = 2.6e-127, P = 2.6e-127 Identities = 239/284 (84%), Positives = 251/284 (88%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISD-HSELGTCTFPSKPP 59 MSTSGTLTSYYVDSLILPE+EELSVPRY +GPG QH+RQ ASI D HSELGTC+FPSKPP Sbjct: 1 MSTSGTLTSYYVDSLILPENEELSVPRYSAGPGHQHSRQPASIGDPHSELGTCSFPSKPP 60 Query: 60 VFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTT 119 VFGPSWSHVPAQFPGTVSSVYHHHYGH QGPVG +TDGRYQSWLLEPMSGSLPMAGLPTT Sbjct: 61 VFGPSWSHVPAQFPGTVSSVYHHHYGHHQGPVGTETDGRYQSWLLEPMSGSLPMAGLPTT 120 Query: 120 HHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEK 179 HHYGIKP+GLG R+ GALPGSHTALLLSDYANGTVATA PVEKD +S GD + EEK Sbjct: 121 HHYGIKPDGLGVRSGGALPGSHTALLLSDYANGTVATAPPVEKDAVSSHTGD-GVDTEEK 179 Query: 180 PGLDPSKSL--------------QNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNT 225 PGLDPSKS ++NPVSNWLHASATRKKRCPYTKHQILELEKEFLFNT Sbjct: 180 PGLDPSKSAVYITFYLYRTYSGDRDNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNT 239 Query: 226 YLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 YLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKD+ Sbjct: 240 YLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDD 283 >sp|Q9IA26|HXA9_HETFR Homeobox protein Hox-A9 Length = 260 Score = 702 (252.2 bits), Expect = 1.9e-69, P = 1.9e-69 Identities = 151/271 (55%), Positives = 186/271 (68%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MSTSGT+++YYVDSLI+ E+E+L RY SG Q +RQ+A +++H + C F SK V Sbjct: 1 MSTSGTISNYYVDSLIMHENEDLLSSRYASGSLAQASRQAA-LTEHPDFSPCNFQSKATV 59 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMAGLPTT 119 F SWS V AQ + +VYH Y H Q P+ A DGRY +SWL +PM G+L GLP++ Sbjct: 60 FSTSWSPVHAQSSANMPTVYHP-YMH-QAPIAAAPDGRYMRSWL-DPMPGTLSFPGLPSS 116 Query: 120 HHYGIKPEGLGTR-ADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEE 178 HYGIKPE + +R +D +HT L LS+Y GT V + + S G+ A+ Sbjct: 117 RHYGIKPEPVASRRSDCTTFETHT-LALSEYTCGTSPADKRVSEVSFSENNGETESNAD- 174 Query: 179 KPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARL 238 K +DP NNP +NWLHA +TRKKRCPYTKHQ LELEKEFLFN YLTRDRRYEVAR+ Sbjct: 175 KLHMDP-----NNPSANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARV 229 Query: 239 LNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 LNLTERQVKIWFQNRRMKMKK NK+ PKD+ Sbjct: 230 LNLTERQVKIWFQNRRMKMKKINKE-RPKDD 259 >sp|P31269|HXA9_HUMAN Homeobox protein Hox-A9 (Hox-1G) Length = 272 Score = 699 (251.1 bits), Expect = 4.0e-69, P = 4.0e-69 Identities = 156/280 (55%), Positives = 186/280 (66%) Query: 1 MSTSGTLTSYYVDSLIL--PESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKP 58 M+T+G L +YYVDS +L ++ELSV RY G Q RQ+A++++H + C+F SK Sbjct: 1 MATTGALGNYYVDSFLLGADAADELSVGRYAPGTLGQPPRQAATLAEHPDFSPCSFQSKA 60 Query: 59 PVFGPSWSHVPAQFPGTV-SSVYHHH----YGHPQGPVGADT-DGRY-QSWLLEPMSGSL 111 VFG SW+ V A V ++VYHHH Y HPQ PV A DGRY +SWL EP G+L Sbjct: 61 TVFGASWNPVHAAGANAVPAAVYHHHHHHPYVHPQAPVAAAAPDGRYMRSWL-EPTPGAL 119 Query: 112 PMAGLPTTHHYGIKPEGLGTRADGALP--GSHTALLLSDYANGTVATASPVEKDTLSGQA 169 AGLP++ YGIKPE L R G P +HT L L+DYA G+ PV+++ + Sbjct: 120 SFAGLPSSRPYGIKPEPLSARR-GDCPTLDTHT-LSLTDYACGS----PPVDREKQPSEG 173 Query: 170 GDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTR 229 AE + G D NNP +NWLHA +TRKKRCPYTKHQ LELEKEFLFN YLTR Sbjct: 174 AFSENNAENESGGDKPPIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTR 233 Query: 230 DRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 DRRYEVARLLNLTERQVKIWFQNRRMKMKK NKD A KDE Sbjct: 234 DRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA-KDE 272 >sp|P09631|HXA9_MOUSE Homeobox protein Hox-A9 (Hox-1.7) Length = 271 Score = 693 (249.0 bits), Expect = 1.7e-68, P = 1.7e-68 Identities = 154/279 (55%), Positives = 184/279 (65%) Query: 1 MSTSGTLTSYYVDSLIL--PESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKP 58 M+T+G L +YYVDS +L ++EL RY G Q RQ+A++++H + C+F SK Sbjct: 1 MATTGALGNYYVDSFLLGADAADELGAGRYAPGTLGQPPRQAAALAEHPDFSPCSFQSKA 60 Query: 59 PVFGPSWSHVPAQFPGTV-SSVYHHH---YGHPQGPVGADT-DGRY-QSWLLEPMSGSLP 112 VFG SW+ V A V ++VYHHH Y HPQ PV A DGRY +SWL EP G+L Sbjct: 61 AVFGASWNPVHAAGANAVPAAVYHHHHHPYVHPQAPVAAAAPDGRYMRSWL-EPTPGALS 119 Query: 113 MAGLPTTHHYGIKPEGLGTRADGALP--GSHTALLLSDYANGTVATASPVEKDTLSGQAG 170 AGLP++ YGIKPE L R G P +HT L L+DYA G+ PV+++ + Sbjct: 120 FAGLPSSRPYGIKPEPLSARR-GDCPTLDTHT-LSLTDYACGS----PPVDREKQPSEGA 173 Query: 171 DVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRD 230 AE + G D NNP +NWLHA +TRKKRCPYTKHQ LELEKEFLFN YLTRD Sbjct: 174 FSENNAENESGGDKPPIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRD 233 Query: 231 RRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 RRYEVARLLNLTERQVKIWFQNRRMKMKK NKD A KDE Sbjct: 234 RRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA-KDE 271 >sp|Q9YGT5|HXA9B_BRARE Homeobox protein Hox-A9b Length = 258 Score = 624 (224.7 bits), Expect = 3.5e-61, P = 3.5e-61 Identities = 143/269 (53%), Positives = 170/269 (63%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MST GTL SYY DS I E+++ PR+ SGP +Q + ++ ++SE TF +K + Sbjct: 1 MSTLGTL-SYYADSHIPHENDDHLAPRFSSGPVVQQQSRELTLLEYSEQEPYTFQAKSSI 59 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGR-YQSWLLEPMSGSLPMAGLPTT 119 FG SWS P Q P S YH + HP D+DG + W LEP+ +LP GL T Sbjct: 60 FGASWS--PVQ-PTGASIAYHPYIHHPCST--GDSDGASVRPWALEPLP-ALPFTGLSTD 113 Query: 120 HHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEK 179 H IK E L + +HT LL+++ N T T V D +S + D AE K Sbjct: 114 THQDIKLEPLVGSGECT---THT-LLVAETDNNTTQTERKVPDDAVSNGSHDEKIPAETK 169 Query: 180 PGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLL 239 LDPSK Q+NP SNWLHA +TRKKRCPYTKHQ LELEKEFLFN YL+RDRRYEVARLL Sbjct: 170 LDLDPSKCNQDNPSSNWLHAKSTRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLL 229 Query: 240 NLTERQVKIWFQNRRMKMKKFNKDGAPKD 268 NLTERQVKIWFQNRRMKMKK NKD PKD Sbjct: 230 NLTERQVKIWFQNRRMKMKKCNKD-RPKD 257 >sp|Q9PWL6|HXA9A_BRARE Homeobox protein Hox-A9a (Hoxx9) Length = 250 Score = 612 (220.5 bits), Expect = 6.6e-60, P = 6.6e-60 Identities = 134/243 (55%), Positives = 154/243 (63%) Query: 27 RYPSGPGLQHARQSASISDHSELGTCTFPSKPPVFGPS-WSHVPAQFPGTVSSVYHHHYG 85 R+ SG GL R + +D S+LG CTFP+K PV+G S W H+P F V SVY H Sbjct: 24 RFSSGLGLIQHRPTILPADLSDLGPCTFPAKQPVYGTSDWGHIPTHFSTGVPSVYQPH-- 81 Query: 86 HPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHHYGIKPEGLGTRADGALPGSHTALL 145 Q PV D QSWLL+ G LP PT +H K + T DG HT L Sbjct: 82 -AQPPVVGDY---VQSWLLDSACG-LPQTEPPTVNHNHAKSDTNETNDDGTEYSPHTILQ 136 Query: 146 LSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKK 205 + NG +T + E + ++GD+ G KPG DP NPVSNWLHAS+TRKK Sbjct: 137 PEVFTNGGCSTKTEAESSRTAEKSGDIEG----KPGADPE-----NPVSNWLHASSTRKK 187 Query: 206 RCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGA 265 RCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNK+ Sbjct: 188 RCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKNET 247 Query: 266 PKD 268 +D Sbjct: 248 KED 250 Score = 321 (118.1 bits), Expect = 4.5e-29, P = 4.5e-29 Identities = 79/191 (41%), Positives = 100/191 (52%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MSTSG LT YYVDS+++P SEE R+ SG GL R + +D S+LG CTFP+K PV Sbjct: 1 MSTSGALTGYYVDSIVIPGSEET---RFSSGLGLIQHRPTILPADLSDLGPCTFPAKQPV 57 Query: 61 FGPS-WSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTT 119 +G S W H+P F V SVY H Q PV D QSWLL+ G LP PT Sbjct: 58 YGTSDWGHIPTHFSTGVPSVYQPH---AQPPVVGDY---VQSWLLDSACG-LPQTEPPTV 110 Query: 120 HHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEK 179 +H K + T DG HT L + NG +T + E + ++GD+ G K Sbjct: 111 NHNHAKSDTNETNDDGTEYSPHTILQPEVFTNGGCSTKTEAESSRTAEKSGDIEG----K 166 Query: 180 PGLDPSKSLQN 190 PG DP + N Sbjct: 167 PGADPENPVSN 177 >sp|P31274|HXC9_HUMAN Homeobox protein Hox-C9 (Hox-3B) Length = 260 Score = 612 (220.5 bits), Expect = 6.6e-60, P = 6.6e-60 Identities = 140/275 (50%), Positives = 175/275 (63%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPS-GPGLQHARQSASISDHSELGTCTFPSKPP 59 MS +G +++YYVDSLI ++E+L R+P+ G AR S + D S+ +C+F KP Sbjct: 1 MSATGPISNYYVDSLISHDNEDLLASRFPATGAHPAAARPSGLVPDCSDFPSCSFAPKPA 60 Query: 60 VFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTT 119 VF SW+ VP+Q SSV +H YG PQ +GADT RY LEP+SG++ P Sbjct: 61 VFSTSWAPVPSQ-----SSVVYHPYG-PQPHLGADT--RYMRTWLEPLSGAVSFPSFPAG 112 Query: 120 -HHYGIKPEGL-GTRADGALPGSHTALLLSDYANGTVATASPVEKDTL-SGQAGDVSGEA 176 HY +KP+ G RAD PG + DY G+ TL S +A ++G Sbjct: 113 GRHYALKPDAYPGRRADCG-PGEGRSY--PDYMYGSPGELRDRAPQTLPSPEADALAGSK 169 Query: 177 --EEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYE 234 EEK LDPS NPV+NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRRYE Sbjct: 170 HKEEKADLDPS-----NPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYE 224 Query: 235 VARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 VAR+LNLTERQVKIWFQNRRMKMKK NK+ K++ Sbjct: 225 VARVLNLTERQVKIWFQNRRMKMKKMNKEKTDKEQ 259 >sp|P09633|HXC9_MOUSE Homeobox protein Hox-C9 (Hox-3.2) Length = 260 Score = 612 (220.5 bits), Expect = 6.6e-60, P = 6.6e-60 Identities = 140/275 (50%), Positives = 175/275 (63%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPS-GPGLQHARQSASISDHSELGTCTFPSKPP 59 MS +G +++YYVDSLI ++E+L R+P+ G AR S + D S+ +C+F KP Sbjct: 1 MSATGPISNYYVDSLISHDNEDLLASRFPATGAHPAAARPSGLVPDCSDFPSCSFAPKPA 60 Query: 60 VFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTT 119 VF SW+ VP+Q SSV +H YG PQ +GADT RY LEP+SG++ P Sbjct: 61 VFSTSWAPVPSQ-----SSVVYHPYG-PQPHLGADT--RYMRTWLEPLSGAVSFPSFPAG 112 Query: 120 -HHYGIKPEGL-GTRADGALPGSHTALLLSDYANGTVATASPVEKDTL-SGQAGDVSGEA 176 HY +KP+ G RAD PG + DY G+ TL S +A ++G Sbjct: 113 GRHYALKPDAYPGRRADCG-PGDGRSY--PDYMYGSPGELRDRAPQTLPSPEADALAGSK 169 Query: 177 --EEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYE 234 EEK LDPS NPV+NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRRYE Sbjct: 170 HKEEKADLDPS-----NPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYE 224 Query: 235 VARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 VAR+LNLTERQVKIWFQNRRMKMKK NK+ K++ Sbjct: 225 VARVLNLTERQVKIWFQNRRMKMKKMNKEKTDKEQ 259 >sp|P28357|HXD9_MOUSE Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2) Length = 339 Score = 373 (136.4 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58 Identities = 69/96 (71%), Positives = 80/96 (83%) Query: 175 EAEEKPGLDPSKSLQ-NNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRY 233 E E++P P + L NNP +NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRRY Sbjct: 244 EEEKQPPQPPQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRY 303 Query: 234 EVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 EVAR+LNLTERQVKIWFQNRRMKMKK +K+ PK + Sbjct: 304 EVARILNLTERQVKIWFQNRRMKMKKMSKEKCPKGD 339 Score = 199 (75.1 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58 Identities = 51/118 (43%), Positives = 70/118 (59%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRY-PSGPGLQHARQSASISDH-----SELGTCTF 54 MS+SGTL++YYVDSLI E +E+ R+ P GPG Q + A ++D +E +C+F Sbjct: 1 MSSSGTLSNYYVDSLIGHEGDEVFAARFGPPGPGTQG--RPAGVADGPAAATAEFASCSF 58 Query: 55 PSKPPVFGPSWSHVPAQFPG--TVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSG 109 K VF SWS V AQ P T+S +YH + P P+ A GRY +SW+ EP+ G Sbjct: 59 APKSSVFSASWSAVAAQPPAAATMSGLYHPYVSPP--PLAAAEPGRYVRSWM-EPLPG 113 Score = 55 (24.4 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58 Identities = 17/52 (32%), Positives = 23/52 (44%) Query: 109 GSLPMAGLPTT-HHYGIKPE-GLGTRADGALPGSHTALLLSDYANGTVATAS 158 G +P G P HYGIKPE G A S ++ S + T +A+ Sbjct: 133 GPVPSPGGPANGRHYGIKPETGAAPAPAAASTSSSSSTSSSSSSKRTECSAA 184 Score = 40 (19.1 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37 Identities = 11/36 (30%), Positives = 18/36 (50%) Query: 30 SGPGLQHARQSASISDHSELGTCTF------PSKPP 59 +GPG + + ++ SDH G C+ P +PP Sbjct: 219 TGPGAVGSSEPSACSDHPSPG-CSLKEEEKQPPQPP 253 >sp|Q9PVQ9|HXC9_ORYLA Homeobox protein Hox-C9 Length = 262 Score = 590 (212.7 bits), Expect = 1.4e-57, P = 1.4e-57 Identities = 138/278 (49%), Positives = 179/278 (64%) Query: 1 MSTSGTLTSYYVDSLILPESEE-LSVPRYPSGPGLQHA--RQSASISDHSELGTCTFPSK 57 MST+G +T+YYVDSLI ES + ++ R+ S PG A R ++ + + + +C+F K Sbjct: 1 MSTTGPITNYYVDSLINHESGDVIAAARF-SAPGSHPAGPRPTSLVPECGDYPSCSFAPK 59 Query: 58 PPVFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMAGL 116 PPVF SW+ V +Q SSV +H Y H P TD RY +SWL EP+SG++P G Sbjct: 60 PPVFSSSWAPVHSQ-----SSVVYHPYSHQ--P-HLSTDSRYMRSWL-EPISGAVPFHGY 110 Query: 117 PTT-HHYGIKPEGLGTRADGALPGSHTALLLSDYAN-GTVATASPVEKDTLSGQAGDV-S 173 P HYG+KP+ G G++ +DY + +++ S ++ + S Sbjct: 111 PGNGRHYGLKPDAFPDHRAGECLGTN-GRTYTDYLYCSSTDMRDKTQQNAPSPESELLTS 169 Query: 174 GE-AEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRR 232 G+ EEKP LDP NNPV+NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRR Sbjct: 170 GKHKEEKPELDP-----NNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRR 224 Query: 233 YEVARLLNLTERQVKIWFQNRRMKMKKFNKD-GAPKDE 269 YEVAR+LNLTERQVKIWFQNRRMKMKK NK+ G KD+ Sbjct: 225 YEVARVLNLTERQVKIWFQNRRMKMKKMNKEKGDSKDQ 262 >sp|P28356|HXD9_HUMAN Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2) Length = 342 Score = 359 (131.4 bits), Expect = 7.3e-56, Sum P(3) = 7.3e-56 Identities = 68/95 (71%), Positives = 77/95 (81%) Query: 177 EEKPGLDPSKSL--QNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYE 234 EEK P + NNP +NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRRYE Sbjct: 248 EEKQHSQPQQQQLDPNNPEANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYE 307 Query: 235 VARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 VAR+LNLTERQVKIWFQNRRMKMKK +K+ PK + Sbjct: 308 VARILNLTERQVKIWFQNRRMKMKKMSKEKCPKGD 342 Score = 193 (73.0 bits), Expect = 7.3e-56, Sum P(3) = 7.3e-56 Identities = 48/118 (40%), Positives = 68/118 (57%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRY-PSGPGLQHARQSASISDH-----SELGTCTF 54 MS+SGTL++YYVDSLI E +E+ R+ P GPG Q + A ++D +E +C+F Sbjct: 1 MSSSGTLSNYYVDSLIGHEGDEVFAARFGPPGPGAQG--RPAGVADGPAATAAEFASCSF 58 Query: 55 PSKPPVFGPSWSHVPAQFPGT--VSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSG 109 + VF SWS VP+Q P +S +YH + P A GRY +SW+ EP+ G Sbjct: 59 APRSAVFSASWSAVPSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRSWM-EPLPG 115 Score = 51 (23.0 bits), Expect = 7.3e-56, Sum P(3) = 7.3e-56 Identities = 19/66 (28%), Positives = 28/66 (42%) Query: 106 PMSGSLPMAGLPTT-HHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDT 164 P G P P HYGIKPE A A S T+ + ++ + T V +++ Sbjct: 131 PGRGPSPGPSGPANGRHYGIKPETRAAPAP-ATAASTTSSSSTSLSSSSKRTECSVARES 189 Query: 165 LSGQAG 170 G +G Sbjct: 190 -QGSSG 194 >sp|Q9IA13|HXD9_HETFR Homeobox protein Hox-D9 Length = 265 Score = 573 (206.8 bits), Expect = 8.9e-56, P = 8.9e-56 Identities = 132/268 (49%), Positives = 158/268 (58%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MST GT+ +YYVDSLI E+E+L RY G +R S ++D S+ +C+F SK Sbjct: 1 MSTGGTIHNYYVDSLIGQETEDLYAARYAQGSHSTASRPSG-VADSSDFSSCSFTSKSTA 59 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMAGL-PT 118 F WS V Q V+ +YH Y H DT RY +SWL EP+S S+ G P Sbjct: 60 FSNPWSPVHPQSSAAVAGIYHP-YMHQSHLAAGDT--RYVRSWL-EPLSSSVSFPGFHPN 115 Query: 119 THHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATAS---PVEKDTLSGQAGDVSGE 175 HYGIKPE L ++ L L ++ G+ P E S + S Sbjct: 116 GRHYGIKPETLSSKRTECSSYELQTLSLPEFTCGSYPECREKLPKELGCTSSETTSNSEH 175 Query: 176 AEEKPG-LDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYE 234 EEK LDP N+P NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRRYE Sbjct: 176 KEEKQQQLDP-----NHPAINWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYE 230 Query: 235 VARLLNLTERQVKIWFQNRRMKMKKFNK 262 VAR+LNLTERQVKIWFQNRRMKMKK NK Sbjct: 231 VARILNLTERQVKIWFQNRRMKMKKMNK 258 >sp|O42502|HXC9A_FUGRU Homeobox protein Hox-C9a (FrHOXC-9) Length = 261 Score = 572 (206.4 bits), Expect = 1.1e-55, P = 1.1e-55 Identities = 136/270 (50%), Positives = 173/270 (64%) Query: 1 MSTSGTLTSYYVDSLILPESEE-LSVPRYPSGPGLQHA--RQSASISDHSELGTCTFPSK 57 MST+G +T+YYVDSLI E+E+ L+ R+ S G A R ++ + + ++ +C+F K Sbjct: 1 MSTTGPITNYYVDSLINHENEDVLAAARF-SAQGSHPAGPRTTSLVPECADFPSCSFAPK 59 Query: 58 PPVFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMAGL 116 PVF SW+ + Q P SV +H Y H P A TD RY +SWL EP+SG++P G Sbjct: 60 APVFSTSWAPMHTQ-P----SVGYHPYSHQ--PHLA-TDSRYMRSWL-EPISGAVPFHGY 110 Query: 117 PTT-HHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDV-SG 174 P HYG+KP+ G GS T +DY T ++ S + V SG Sbjct: 111 PGNGRHYGLKPDAFQEHRAGDCLGS-TGRTYADYLYCTADIRDKTHQNIPSPEPELVASG 169 Query: 175 E-AEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRY 233 + +EKP LDP NNPV+NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRR+ Sbjct: 170 KHKDEKPELDP-----NNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRF 224 Query: 234 EVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 EVAR+LNLTERQVKIWFQNRRMKMKK NK+ Sbjct: 225 EVARVLNLTERQVKIWFQNRRMKMKKMNKE 254 >sp|Q9YGS6|HXC9A_BRARE Homeobox protein Hox-C9a (Hox-C9) Length = 260 Score = 567 (204.7 bits), Expect = 3.8e-55, P = 3.8e-55 Identities = 128/268 (47%), Positives = 171/268 (63%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPS-GPGLQHARQSASISDHSELGTCTFPSKPP 59 MS +G +++YYVDSLI ESE++ R+ + GP +R + + + ++ +C+F KPP Sbjct: 1 MSATGPISNYYVDSLINHESEDVLASRFTATGPISSSSRPTPLVPECADYPSCSFAPKPP 60 Query: 60 VFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMAGLP- 117 VF SW+ V +Q SSV +H Y H Q +G TD RY +SWL EP+ G++ G Sbjct: 61 VFTTSWAPVHSQ-----SSVVYHPYTH-QPHLG--TDSRYVRSWL-EPIPGTVSFPGYAG 111 Query: 118 TTHHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSG--E 175 + HYG+KP+ G GS+ +DY + +++T S + +S Sbjct: 112 NSRHYGLKPDTFQDPRAGDCLGSN-GRTYTDYLYCSAVDIREKQQNTPSPETESLSSGKH 170 Query: 176 AEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEV 235 ++K LDP NNPV+NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRRYEV Sbjct: 171 KDDKAELDP-----NNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEV 225 Query: 236 ARLLNLTERQVKIWFQNRRMKMKKFNKD 263 AR+LNLTERQVKIWFQNRRMKMKK NK+ Sbjct: 226 ARVLNLTERQVKIWFQNRRMKMKKMNKE 253 >sp|Q1KKS9|HXD9A_FUGRU Homeobox protein Hox-D9a Length = 273 Score = 539 (194.8 bits), Expect = 3.6e-52, P = 3.6e-52 Identities = 124/274 (45%), Positives = 166/274 (60%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MSTSG L++ YVD+++ +SE++ RY P + R S S+ D+++ +C F K V Sbjct: 8 MSTSGPLSNCYVDAIMGQDSEDVYGARYIQAPHMVTPRPS-SVGDNADFASCNFAPKSAV 66 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY---QSWLLEPMSGSLPMAGLP 117 F SWS V Q G HHH+ H Q + + DGRY +SW+ EP+S + AGL Sbjct: 67 FSSSWSSVHPQ--GIYHPYVHHHHHHHQSHLPS-ADGRYVGVRSWM-EPISNHVSFAGLH 122 Query: 118 TT-HHYGIKPEGLGTR-ADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGE 175 T+ YG KPE L + A+ + + L + + A K+ + + Sbjct: 123 TSGRSYGTKPEVLPLKDAECDALEAESRPLSAGFVCAAAACPDRARKEHGASELPSHDEH 182 Query: 176 AEEKPG-LDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYE 234 EEK LDP NNP +NW+HA +TRKKRCPYTK+Q LELEKEFL+N YLTRDRRYE Sbjct: 183 KEEKQQQLDP-----NNPAANWIHARSTRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYE 237 Query: 235 VARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKD 268 VAR+L+LTERQVKIWFQNRRMKMKK N++ + K+ Sbjct: 238 VARILSLTERQVKIWFQNRRMKMKKQNRERSGKE 271 >sp|Q9PVR2|HXD9_ORYLA Homeobox protein Hox-D9 Length = 271 Score = 536 (193.7 bits), Expect = 7.4e-52, P = 7.4e-52 Identities = 124/280 (44%), Positives = 168/280 (60%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MS+SGT+++YYVD ++ E E++ PR R S + D+++ +C F KP V Sbjct: 8 MSSSGTISNYYVDGVMAQEPEDVYAPRLIQASHTVTPRPSGA-GDNADFSSCNFAPKPGV 66 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY---QSWLLEPMSGSLPMAGL- 116 F SWS V Q +YH + H P + TDGRY + W+ EP+S + AG Sbjct: 67 FSSSWSSVHPQ------GIYHPYVHHHHQPHLSATDGRYVGVRPWM-EPISNHVSFAGFH 119 Query: 117 PT-THHYGIKPEGLGTRA---DGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDV 172 P+ T YG KP+ L + D P + + ++++ G A V K+ +A ++ Sbjct: 120 PSNTRPYGAKPDVLPAKVPECDTLEPEARP--VPAEFSCGGALGAEKVTKE--QRRASEI 175 Query: 173 SGEAE---EKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTR 229 S E EK LDP NNP +NW+HA +TRKKRCPYTK+Q LELEKEFL+N YLTR Sbjct: 176 SSHGEPKDEKQQLDP-----NNPAANWIHARSTRKKRCPYTKYQTLELEKEFLYNMYLTR 230 Query: 230 DRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 DRR+EVAR+L+LTERQVKIWFQNRRMKMKK N++ KD+ Sbjct: 231 DRRFEVARILSLTERQVKIWFQNRRMKMKKMNREKGGKDQ 270 >sp|Q9PWM6|HXD9A_BRARE Homeobox protein Hox-D9a (Hox-D9) Length = 262 Score = 526 (190.2 bits), Expect = 8.5e-51, P = 8.5e-51 Identities = 121/271 (44%), Positives = 161/271 (59%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MSTS L+SYYVD+++ E+E++ RY G AR S + ++++ +C+F K V Sbjct: 1 MSTSSALSSYYVDTIMGHEAEDVYGARYIQGSHTAPARPSGVV-ENADFSSCSFAPKSAV 59 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMAGL-PT 118 F SWS V VS +YH Y H Q + +D RY +SW+ EP++ + + G P Sbjct: 60 FPASWSSVHQPSTAAVSGIYHP-YVH-QTHL---SDNRYVRSWI-EPVANHISLTGFHPN 113 Query: 119 THHYGIKPEGLGT-RADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAE 177 + H G K E L R + A + T + N A + +K T D S E Sbjct: 114 SRHSGTKTESLPPKRTESAAFETETPSVPEFSLN---AVSESADKATEERVGSDNSSHGE 170 Query: 178 EKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVAR 237 K + +NP +NW+HA +TRKKRCPYTK+Q LELEKEFL+N YLTRDRRYEVAR Sbjct: 171 PKDEKQQQQLDPSNPAANWIHARSTRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVAR 230 Query: 238 LLNLTERQVKIWFQNRRMKMKKFNKDGAPKD 268 +LNLTERQVKIWFQNRRMKMKK N++ + KD Sbjct: 231 ILNLTERQVKIWFQNRRMKMKKMNRERSSKD 261 >sp|Q98924|HXA9_CHICK Homeobox protein Hox-A9 Length = 169 Score = 522 (188.8 bits), Expect = 2.3e-50, P = 2.3e-50 Identities = 117/181 (64%), Positives = 130/181 (71%) Query: 96 DGRY-QSWLLEPMSGSLPMAGLPTTHHYGIKPEGLGTR-ADGALPGSHTALLLSDYANGT 153 DGRY +SWL EP+ GSL GLPT+ HYGIKPE L R D +HT L LSD G+ Sbjct: 1 DGRYMRSWL-EPVPGSLSFPGLPTSRHYGIKPEPLAARRGDCTTFDTHT-LSLSDLPCGS 58 Query: 154 VATASPVEKDTLS--GQAGDVSGEAE---EKPGLDPSKSLQNNPVSNWLHASATRKKRCP 208 PV++D S G + +GE+E EKP +DP NNP +NWLHA +TRKKRCP Sbjct: 59 ----PPVDRDKQSHEGAFSENNGESEANGEKPHIDP-----NNPAANWLHARSTRKKRCP 109 Query: 209 YTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKD 268 YTKHQ LELEKEFLFN YLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK NKD A KD Sbjct: 110 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA-KD 168 Query: 269 E 269 E Sbjct: 169 E 169 >sp|Q1KKZ3|HXA9B_FUGRU Homeobox protein Hox-A9b Length = 249 Score = 515 (186.3 bits), Expect = 1.2e-49, P = 1.2e-49 Identities = 125/262 (47%), Positives = 149/262 (56%) Query: 6 TLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPVFGPSW 65 TL + Y + ++ PRYPS G++ ++++ +C K +F SW Sbjct: 3 TLGTSYYAEASVLSEQDEIAPRYPSAAGVEQTM----LTEYGGHESCPLQGKSTLFAGSW 58 Query: 66 SHVPAQFPGTVSSVY-HHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMAGLPT-THHY 122 S + P + Y HHHY D+DG + +SW L+P SL + GLP+ T HY Sbjct: 59 SPITTHPPNPGAPTYIHHHY------TSGDSDGMFTRSWALDP--ASLCLTGLPSATMHY 110 Query: 123 GIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEK-DTLSGQAGDVSGEAEEKPG 181 IKPE L A+ +HT LL SD N P E T GD + AEE Sbjct: 111 EIKPEPLIGSAECTPLETHTPLL-SDIGNDATIAKIPCESTSTDKALKGDKT--AEETRE 167 Query: 182 LDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNL 241 D NNP SNWLHA TRKKRCPYTKHQILELEKEFLFN YL RDRRYEVARLL+L Sbjct: 168 RDA-----NNPSSNWLHAKPTRKKRCPYTKHQILELEKEFLFNMYLPRDRRYEVARLLHL 222 Query: 242 TERQVKIWFQNRRMKMKKFNKD 263 TERQVKIWFQNRRMKMKK NKD Sbjct: 223 TERQVKIWFQNRRMKMKKENKD 244 >sp|Q9PWM2|HXB9A_BRARE Homeobox protein Hox-B9a (Hox-B9) Length = 249 Score = 445 (161.7 bits), Expect = 3.3e-42, P = 3.3e-42 Identities = 111/228 (48%), Positives = 137/228 (60%) Query: 45 DHSELGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWL 103 +H E +C+F KPPVF SWS + + +VYH + P PV + TD RY ++WL Sbjct: 43 EHPEFPSCSFQPKPPVFSSSWSPFSSHASNGLPAVYHPYI--PTQPVPS-TDTRYLRTWL 99 Query: 104 -LEPMSGSLPMAGLPTTHHYGIKPEGL-GTRADGA-LPGSHTALLLSDYANGTVATASPV 160 P + LP G +K E L G + L G H +L S A + S Sbjct: 100 DCAPRAEPLPGQGQ-------VKMEPLLGHLGEPPKLVGQHEYILESSTAREINSGHSAG 152 Query: 161 EKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKE 220 +D D+ +E+K G D QN+P +NWLHA ++RKKRCPYTK+Q LELEKE Sbjct: 153 FEDNK-----DICEGSEDKEGPD-----QNDPSANWLHARSSRKKRCPYTKYQTLELEKE 202 Query: 221 FLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKD 268 FLFN YLTRDRR+EVARLLNLTERQVKIWFQNRRMKMKK NKD PK+ Sbjct: 203 FLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNKD-QPKE 249 Score = 189 (71.6 bits), Expect = 4.4e-15, P = 4.4e-15 Identities = 51/136 (37%), Positives = 71/136 (52%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MS SGTL++YYVDS+I E E+ + R+ S ARQ +H E +C+F KPPV Sbjct: 1 MSISGTLSNYYVDSIISHEGEDPNASRF-SNVQYSSARQPGP-GEHPEFPSCSFQPKPPV 58 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWL-----LEPMSGSLPMA 114 F SWS + + +VYH + P PV + TD RY ++WL EP+ G + Sbjct: 59 FSSSWSPFSSHASNGLPAVYHPYI--PTQPVPS-TDTRYLRTWLDCAPRAEPLPGQGQVK 115 Query: 115 GLPTTHHYGIKPEGLG 130 P H G P+ +G Sbjct: 116 MEPLLGHLGEPPKLVG 131 >sp|P50209|HXA9_AMBME Homeobox protein Hox-A9 Length = 143 Score = 444 (161.4 bits), Expect = 4.2e-42, P = 4.2e-42 Identities = 98/155 (63%), Positives = 107/155 (69%) Query: 121 HYGIKPEGL--GTRADGA--LPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEA 176 HYGIKPE L GTR SHT L LSDY + SP +K + G + E Sbjct: 2 HYGIKPEPLPPGTRRGDCTTFDSSHT-LSLSDYGS------SPADKQSSEGAFPEAPAET 54 Query: 177 E---EKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRY 233 E +KP +DP NNP +NWLHA +TRKKRCPYTKHQ LELEKEFLFN YLTRDRRY Sbjct: 55 EASGDKPAIDP-----NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRY 109 Query: 234 EVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKD 268 EVARLLNLTERQVKIWFQNRRMKMKK NKD PK+ Sbjct: 110 EVARLLNLTERQVKIWFQNRRMKMKKINKD-RPKE 143 >sp|P20615|HXB9_MOUSE Homeobox protein Hox-B9 (Hox-2.5) Length = 250 Score = 437 (158.9 bits), Expect = 2.3e-41, P = 2.3e-41 Identities = 108/235 (45%), Positives = 138/235 (58%) Query: 32 PGLQHAR-QSASISDHSELGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHYGHPQGP 90 P Q+A + ++H + +C+F K PVFG +W+ + G++ SVYH Y PQG Sbjct: 29 PSGQYANPRQPGHAEHLDFPSCSFQPKAPVFGATWAPLSPHASGSLPSVYHP-YLQPQGA 87 Query: 91 VGADTDGRY-QSWLLEPMSGSLPMA-GLPTTHHYGIKPEGLGTRADGALPGSHTALLLSD 148 A++ RY ++WL EP P A P +K E L GA PG + Sbjct: 88 PAAES--RYLRTWL-EPA----PRAEAAPGQGQAAVKAEPLL----GA-PGELLKQGTPE 135 Query: 149 YANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCP 208 Y+ T A V + +G + E E D + Q NP +NWLHA ++RKKRCP Sbjct: 136 YSLETSAGREAVLSNQRAGYGDNKICEGSE----DKERPGQTNPSANWLHARSSRKKRCP 191 Query: 209 YTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 YTK+Q LELEKEFLFN YLTRDRR+EVARLLNL+ERQVKIWFQNRRMKMKK NK+ Sbjct: 192 YTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKE 246 Score = 200 (75.5 bits), Expect = 3.0e-16, P = 3.0e-16 Identities = 69/192 (35%), Positives = 97/192 (50%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MS SGTL+SYYVDS+I ESE+ ++PSG + RQ ++H + +C+F K PV Sbjct: 1 MSISGTLSSYYVDSIISHESEDAPPAKFPSGQ-YANPRQPGH-AEHLDFPSCSFQPKAPV 58 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEPMSGSLPMA-GLPT 118 FG +W+ + G++ SVYH Y PQG A++ RY ++WL EP P A P Sbjct: 59 FGATWAPLSPHASGSLPSVYHP-YLQPQGAPAAES--RYLRTWL-EPA----PRAEAAPG 110 Query: 119 THHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGD----VSG 174 +K E L GA PG +Y+ T A V + +G GD Sbjct: 111 QGQAAVKAEPLL----GA-PGELLKQGTPEYSLETSAGREAVLSNQRAGY-GDNKICEGS 164 Query: 175 EAEEKPG-LDPS 185 E +E+PG +PS Sbjct: 165 EDKERPGQTNPS 176 >sp|P17482|HXB9_HUMAN Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5) Length = 250 Score = 435 (158.2 bits), Expect = 3.7e-41, P = 3.7e-41 Identities = 110/235 (46%), Positives = 136/235 (57%) Query: 32 PGLQHA--RQSASISDHSELGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHYGHPQG 89 P Q+A RQ ++H E +C+F K PVFG SW+ + G++ SVYH Y PQG Sbjct: 29 PSGQYASSRQPGH-AEHLEFPSCSFQPKAPVFGASWAPLSPHASGSLPSVYHP-YIQPQG 86 Query: 90 PVGADTDGRY-QSWLLEPMSGSLPMAGLPTTHHYGIKPEGLGTRADGALPGSHTALLLSD 148 A++ RY ++WL EP P +K E L GA PG + Sbjct: 87 VPPAES--RYLRTWL-EPAPRG---EAAPGQGQAAVKAEPLL----GA-PGELLKQGTPE 135 Query: 149 YANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCP 208 Y+ T A V + G + E E D + Q NP +NWLHA ++RKKRCP Sbjct: 136 YSLETSAGREAVLSNQRPGYGDNKICEGSE----DKERPDQTNPSANWLHARSSRKKRCP 191 Query: 209 YTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 YTK+Q LELEKEFLFN YLTRDRR+EVARLLNL+ERQVKIWFQNRRMKMKK NK+ Sbjct: 192 YTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKE 246 Score = 198 (74.8 bits), Expect = 4.9e-16, P = 4.9e-16 Identities = 48/107 (44%), Positives = 66/107 (61%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 MS SGTL+SYYVDS+I ESE+ ++PSG +RQ ++H E +C+F K PV Sbjct: 1 MSISGTLSSYYVDSIISHESEDAPPAKFPSGQ-YASSRQPGH-AEHLEFPSCSFQPKAPV 58 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLEP 106 FG SW+ + G++ SVYH Y PQG A++ RY ++WL EP Sbjct: 59 FGASWAPLSPHASGSLPSVYHP-YIQPQGVPPAES--RYLRTWL-EP 101 >sp|P51783|HXA9_CAVPO Homeobox protein Hox-A9 (Hox-1.7) Length = 162 Score = 385 (140.6 bits), Expect = 7.4e-36, P = 7.4e-36 Identities = 78/99 (78%), Positives = 82/99 (82%) Query: 171 DVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRD 230 D SG+ KP +DP NNP +NWLHA +TRKKRCPYTKHQ LELEKEFLFN YLTRD Sbjct: 73 DSSGD---KPPIDP-----NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRD 124 Query: 231 RRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 RRYEVARLLNLTERQVKIWFQNRRMKMKK NKD A KDE Sbjct: 125 RRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA-KDE 162 >sp|Q1KKY2|HXB9A_FUGRU Homeobox protein Hox-B9a Length = 255 Score = 383 (139.9 bits), Expect = 1.2e-35, P = 1.2e-35 Identities = 113/276 (40%), Positives = 150/276 (54%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVP-RYPSGPGLQHA-RQSASISDHSELGTCTFPSKP 58 MS SGTL++YYVDS+I ES++L+ R+PS +Q++ SA+ ++ + G P Sbjct: 1 MSISGTLSNYYVDSIISHESDDLTASTRFPS---VQYSGSSSAAAANGRQPGGAVHAEHP 57 Query: 59 -PVFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLP 117 P PS S P P SS + H G + Y +L P +P Sbjct: 58 HPEPYPSCSFQPK--PPVFSSSWSPFSPH-HG--ASSLPAVYHPYL--------PAQHVP 104 Query: 118 TTHHYGIKPE-GLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEA 176 + ++ R ++ G HT + + G + P + LSGQ + Sbjct: 105 SADTRYLRSWLDCAPRGSESVQG-HTGQVKLEPQLGHLGGEIPAK---LSGQHPHDNPRT 160 Query: 177 --EEKP--GLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRR 232 +P G S ++P +NWLHA ++RKKRCPYTK+Q LELEKEFLFN YLTRDRR Sbjct: 161 CWSRRPRLGFHLLLSPSDDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRR 220 Query: 233 YEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKD 268 +EVAR LNLTERQVKIWFQNRRMKMKK +KD PKD Sbjct: 221 HEVARALNLTERQVKIWFQNRRMKMKKQSKD-QPKD 255 >sp|Q28601|HXC9_SHEEP Homeobox protein Hox-C9 Length = 96 Score = 372 (136.0 bits), Expect = 1.8e-34, P = 1.8e-34 Identities = 72/97 (74%), Positives = 80/97 (82%) Query: 173 SGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRR 232 S EEK LDPS NPV+NW+HA +TRKKRCPYTK+Q LELEKEFLFN YLTRDRR Sbjct: 4 SKHKEEKADLDPS-----NPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRR 58 Query: 233 YEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAPKDE 269 YEVAR+LNLTERQVKIWFQNRRMKMKK NK+ K++ Sbjct: 59 YEVARVLNLTERQVKIWFQNRRMKMKKMNKEKTDKEQ 95 >sp|P31272|HXB9_XENLA Homeobox protein Hox-B9 (XlHbox-6) Length = 232 Score = 363 (132.8 bits), Expect = 1.6e-33, P = 1.6e-33 Identities = 102/246 (41%), Positives = 133/246 (54%) Query: 30 SGPGLQHARQSASISDHSELGTCTFPSK-PPVFGPSWSHVPAQFPG-TVSSVYHHHYGHP 87 SGP + QS D E F ++ P P+ S P FP + S+ ++ HP Sbjct: 4 SGPLTNYFVQSIISPDTDETPAAKFSAQFPNPRAPAQSE-PLDFPSCSFSASWNFLTPHP 62 Query: 88 QGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHHYGIKP---EGLGTRADGAL--PGSHT 142 PV YQ ++ + G P+ ++ G +++ L PG Sbjct: 63 --PV-------YQPYIQQQQQQE---EGAPSAEGRYLRAWLDNGPSLKSEPLLGPPGDKL 110 Query: 143 ALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASAT 202 A+ A A+ E+ T SG D G E G + ++ QNNP +NWLHA ++ Sbjct: 111 GPQHYTVASPGGAAAN-TERSTHSGNFPDTKG-TEGTAG-ETDRTHQNNPSANWLHARSS 167 Query: 203 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNK 262 RKKRCPY+K+Q LELEKEF FN YLTRDRR+EVARLLNL+ERQVKIWFQNRRMKMKK NK Sbjct: 168 RKKRCPYSKYQTLELEKEFKFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKLNK 227 Query: 263 DGAPKD 268 D + KD Sbjct: 228 DQS-KD 232 Score = 87 (35.7 bits), Expect = 0.15, P = 0.14 Identities = 43/168 (25%), Positives = 70/168 (41%) Query: 1 MSTSGTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPV 60 M+ SG LT+Y+V S+I P+++E ++ + + R A S+ + +C+F + Sbjct: 1 MAISGPLTNYFVQSIISPDTDETPAAKFSAQ--FPNPRAPAQ-SEPLDFPSCSFSASWNF 57 Query: 61 FGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRY-QSWLLE-PMSGSLPMAGLPT 118 P H P P + G P +GRY ++WL P S P+ G P Sbjct: 58 LTP---HPPVYQP-YIQQQQQQEEGAPSA------EGRYLRAWLDNGPSLKSEPLLGPPG 107 Query: 119 T----HHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEK 162 HY + G G A+ +H+ D GT TA ++ Sbjct: 108 DKLGPQHYTVASPG-GAAANTER-STHSGNF-PD-TKGTEGTAGETDR 151 >sp|Q1KKZ4|HXAAB_FUGRU Homeobox protein Hox-A10b Length = 331 Score = 312 (114.9 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30 Identities = 65/115 (56%), Positives = 80/115 (69%) Query: 155 ATASPV-EKDTLSGQAGDVSGEAEEKPGLD-PSKSLQ----NNPVSNWLHASATRKKRCP 208 A PV E+D+ G S E E P L+ P KS + N +NWL A + RKKRCP Sbjct: 204 APCVPVREEDSRLSSEGSSSPEPAETPSLECPEKSGKGDGKNETAANWLTAKSGRKKRCP 263 Query: 209 YTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 YTKHQ LELEKEFLFN YLTR+RR E++R ++LT+RQVKIWFQNRRMK+KK ++ Sbjct: 264 YTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMTRE 318 Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30 Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 39 QSASISDHS-ELGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHYGHP 87 + A++ D S +C S PV P + + +Q T +S H+H HP Sbjct: 121 KGATVDDISYSASSCPVTSTFPV--PGYFRL-SQ---TYASSRHYHDAHP 164 >sp|Q1KKR7|HXD9B_FUGRU Homeobox protein Hox-D9b Length = 301 Score = 320 (117.7 bits), Expect = 5.7e-29, P = 5.7e-29 Identities = 64/95 (67%), Positives = 72/95 (75%) Query: 167 GQAGDVSGEAEEKPGLDPSKSLQN--NPVSNWLHASATRKKRCPYTKHQILELEKEFLFN 224 G A + + E K + K+ N NP +W+HA +TRKKRCPYTKHQ LELEKEFL+N Sbjct: 196 GAAEEPKKKPERKKDGEERKTQTNAENPSVSWIHAKSTRKKRCPYTKHQTLELEKEFLYN 255 Query: 225 TYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 259 YLTRDRR EVA LLNLTERQVKIWFQNRRMKMKK Sbjct: 256 MYLTRDRRLEVAGLLNLTERQVKIWFQNRRMKMKK 290 >sp|Q1KKT0|HXDAA_FUGRU Homeobox protein Hox-D10a Length = 336 Score = 315 (115.9 bits), Expect = 1.9e-28, P = 1.9e-28 Identities = 66/107 (61%), Positives = 81/107 (75%) Query: 157 ASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILE 216 ++ VEK S +A S E +K G D SKS Q P +NWL A + RKKRCPYTKHQ LE Sbjct: 221 SATVEK-ICSPEASASSPELLQKEGKD-SKSDQ--PANNWLTAKSGRKKRCPYTKHQTLE 276 Query: 217 LEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 LEKEFLFN YLTR+RR E++R +NLT+RQVKIWFQNRRMK+KK +++ Sbjct: 277 LEKEFLFNMYLTRERRLEISRSVNLTDRQVKIWFQNRRMKLKKMSRE 323 >sp|P31258|HXA11_CHICK Homeobox protein Hox-A11 (Ghox-1I) (Chox-1.9) Length = 297 Score = 269 (99.8 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28 Identities = 57/117 (48%), Positives = 73/117 (62%) Query: 150 ANGTVATASPVEKDTLSGQAGDVSGEAEEKP--GLDPSKSLQNNPV-SNWLHASATRKKR 206 A T AT+S + G A E +P G P S NN S TRKKR Sbjct: 172 AGATAATSS--SEGGCGGAAAAAGKERRRRPESGSSPESSSGNNEEKSGSSSGQRTRKKR 229 Query: 207 CPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 CPYTK+QI ELE+EF F+ Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 230 CPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINRD 286 Score = 60 (26.2 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28 Identities = 33/114 (28%), Positives = 49/114 (42%) Query: 44 SDHSELGTCTFPSKPPVFGPSWSHVPAQFPGTVSS---VYHHHYGHPQ-GPVGADTDGRY 99 S + L +CT+ V GP +S +P+ P T SS Y + PQ PV T + Sbjct: 11 SSNMYLPSCTYY----VSGPDFSSLPSFLPQTPSSRPMTYSYSSNLPQVQPVREVT---F 63 Query: 100 QSWLLEPMSGSLPMAGLPTTHHYGIKPEGLGTRADGALPGSHTALLLSDYANGT 153 + + ++P S P LP H Y E + R LP + TA + + T Sbjct: 64 REYAIDPSSKWHPRNNLP--HCYSA--EEIMHR--DCLPSTTTASMGEVFGKST 111 >sp|P31257|HXC10_MOUSE Homeobox protein Hox-C10 (Hox-3.6) Length = 342 Score = 312 (114.9 bits), Expect = 4.0e-28, P = 4.0e-28 Identities = 59/107 (55%), Positives = 75/107 (70%) Query: 157 ASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILE 216 ASP E + + D S + + + K+ N NWL A + RKKRCPYTKHQ LE Sbjct: 225 ASPSESEKERAKTADSSPDTSDNEAKEEIKA--ENTTGNWLTAKSGRKKRCPYTKHQTLE 282 Query: 217 LEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 LEKEFLFN YLTR+RR E+++ +NLT+RQVKIWFQNRRMK+KK N++ Sbjct: 283 LEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNRE 329 >sp|P28358|HXD10_HUMAN Homeobox protein Hox-D10 (Hox-4D) (Hox-4E) Length = 340 Score = 312 (114.9 bits), Expect = 4.0e-28, P = 4.0e-28 Identities = 61/105 (58%), Positives = 78/105 (74%) Query: 159 PVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELE 218 P E+ L+ + S E +EK + KS + P SNWL A + RKKRCPYTKHQ LELE Sbjct: 226 PEERSCLA-EVSVSSPEVQEKESKEEIKS--DTPTSNWLTAKSGRKKRCPYTKHQTLELE 282 Query: 219 KEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 KEFLFN YLTR+RR E+++ +NLT+RQVKIWFQNRRMK+KK +++ Sbjct: 283 KEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 327 >sp|Q9NYD6|HXC10_HUMAN Homeobox protein Hox-C10 Length = 342 Score = 312 (114.9 bits), Expect = 4.0e-28, P = 4.0e-28 Identities = 59/106 (55%), Positives = 75/106 (70%) Query: 158 SPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILEL 217 SP E + +A D S + + + K+ N NWL A + RKKRCPYTKHQ LEL Sbjct: 226 SPSESEKERAKAADSSPDTSDNEAKEEIKA--ENTTGNWLTAKSGRKKRCPYTKHQTLEL 283 Query: 218 EKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 EKEFLFN YLTR+RR E+++ +NLT+RQVKIWFQNRRMK+KK N++ Sbjct: 284 EKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNRE 329 >sp|P28359|HXD10_MOUSE Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3) Length = 340 Score = 309 (113.8 bits), Expect = 8.4e-28, P = 8.4e-28 Identities = 60/105 (57%), Positives = 78/105 (74%) Query: 159 PVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELE 218 P ++ L+ + S E +EK + KS + P SNWL A + RKKRCPYTKHQ LELE Sbjct: 226 PEDRSCLA-EVSVSSPEVQEKESKEEIKS--DTPTSNWLTAKSGRKKRCPYTKHQTLELE 282 Query: 219 KEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 KEFLFN YLTR+RR E+++ +NLT+RQVKIWFQNRRMK+KK +++ Sbjct: 283 KEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 327 >sp|P31260|HXA10_HUMAN Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL) Length = 393 Score = 308 (113.5 bits), Expect = 1.1e-27, P = 1.1e-27 Identities = 92/219 (42%), Positives = 111/219 (50%) Query: 54 FPSKPP----VFGPSWSHVPAQFPG--TVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPM 107 FP PP G S S VP PG +S Y G+ G GA G P Sbjct: 174 FPRGPPPDGCALGTS-SGVPV--PGYFRLSQAYGTAKGYGSGGGGAQQLGA------GPF 224 Query: 108 SGSLPMAG--LPTTHHYGIKPEGLGTRADGALPGSHTALLLSDYANGTV-ATASPVEKDT 164 P G LP G RA + P A + G A AS + Sbjct: 225 PAQPPGRGFDLPPALASGSADAARKERALDSPPPPTLACGSGGGSQGDEEAHASSSAAEE 284 Query: 165 LSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFN 224 LS + S + EK L SK +N +NWL A + RKKRCPYTKHQ LELEKEFLFN Sbjct: 285 LSPAPSESSKASPEKDSLGNSKG-EN--AANWLTAKSGRKKRCPYTKHQTLELEKEFLFN 341 Query: 225 TYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 YLTR+RR E++R ++LT+RQVKIWFQNRRMK+KK N++ Sbjct: 342 MYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRE 380 >sp|Q90469|HXDAA_BRARE Homeobox protein Hox-D10a (Hox-D10) (Hox-C10) Length = 343 Score = 308 (113.5 bits), Expect = 1.1e-27, P = 1.1e-27 Identities = 61/106 (57%), Positives = 79/106 (74%) Query: 158 SPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILEL 217 S +E+ S +A S E + G + SK+ + P SNWL A + RKKRCPYTKHQ LEL Sbjct: 217 STLEEKNCSTEASVSSPELPHREGKE-SKN--DTPTSNWLTAKSGRKKRCPYTKHQTLEL 273 Query: 218 EKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 EKEFLFN YLTR+RR E+++ +NLT+RQVKIWFQNRRMK+KK +++ Sbjct: 274 EKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 319 >sp|P31310|HXA10_MOUSE Homeobox protein Hox-A10 (Hox-1.8) Length = 399 Score = 305 (112.4 bits), Expect = 2.2e-27, P = 2.2e-27 Identities = 63/109 (57%), Positives = 78/109 (71%) Query: 155 ATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQI 214 A AS + LS + S + EK L SK +N +NWL A + RKKRCPYTKHQ Sbjct: 281 AHASSSAAEELSPAPSENSKASPEKDSLGSSKG-EN--AANWLTAKSGRKKRCPYTKHQT 337 Query: 215 LELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 LELEKEFLFN YLTR+RR E++R ++LT+RQVKIWFQNRRMK+KK N++ Sbjct: 338 LELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRE 386 >sp|Q9IA27|HXA10_HETFR Homeobox protein Hox-A10 Length = 271 Score = 303 (111.7 bits), Expect = 3.6e-27, P = 3.6e-27 Identities = 67/139 (48%), Positives = 91/139 (65%) Query: 126 PEGLGTR-ADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDP 184 P LG + ++G PG T + A ++A+ E + ++ S E E K + Sbjct: 127 PTELGRKGSEGTSPGHLTCSSEREEAEAAASSANE-ESSPVPSESNKNSPEKETKGEV-- 183 Query: 185 SKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTER 244 K+ +N +NWL A + RKKRCPYTKHQ LELEKEFLFN YLTR+RR E++R ++LT+R Sbjct: 184 -KA-ENG--ANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDR 239 Query: 245 QVKIWFQNRRMKMKKFNKD 263 QVKIWFQNRRMK+KK N++ Sbjct: 240 QVKIWFQNRRMKLKKMNRE 258 >sp|Q9IA14|HXD10_HETFR Homeobox protein Hox-D10 Length = 336 Score = 302 (111.4 bits), Expect = 4.6e-27, P = 4.6e-27 Identities = 60/107 (56%), Positives = 74/107 (69%) Query: 158 SPVEKDTLSGQAGDVSGEAEEKPGLD-PSKSLQNNPVSNWLHASATRKKRCPYTKHQILE 216 SP K L + G A D +K P+SNWL A + RKKRCPYTK+Q LE Sbjct: 217 SPEPKPRLLEVSATAEGAATSSELSDNETKEEIKTPISNWLTAKSGRKKRCPYTKYQTLE 276 Query: 217 LEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 LEKEFLFN YLTR+RR E+++ +NLT+RQVKIWFQNRRMK+KK N++ Sbjct: 277 LEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMNRE 323 >sp|P10179|HMB4_TRIGR Homeobox protein HB4 Length = 107 Score = 297 (109.6 bits), Expect = 1.6e-26, P = 1.6e-26 Identities = 56/69 (81%), Positives = 62/69 (89%) Query: 194 SNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNR 253 +NWL A++ RKKRCPYTK Q LELEKEFLFN YLTRDRR E+ARLL+LTERQVKIWFQNR Sbjct: 34 ANWLSATSGRKKRCPYTKFQTLELEKEFLFNMYLTRDRRLEIARLLSLTERQVKIWFQNR 93 Query: 254 RMKMKKFNK 262 RMKMKK N+ Sbjct: 94 RMKMKKQNR 102 >sp|Q9PWL7|HXBAA_BRARE Homeobox protein Hox-B10a (Hox-B10) Length = 85 Score = 295 (108.9 bits), Expect = 2.6e-26, P = 2.6e-26 Identities = 53/78 (67%), Positives = 64/78 (82%) Query: 191 NPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWF 250 N + WL A A RKKRCPY+KHQILELEKEFLFN YLTR+RR E++R +NLT+RQVKIWF Sbjct: 1 NAANGWLSAKAGRKKRCPYSKHQILELEKEFLFNMYLTRERRLEISRSINLTDRQVKIWF 60 Query: 251 QNRRMKMKKFNKDGAPKD 268 QNRRMK+KK ++ +D Sbjct: 61 QNRRMKLKKMTREHRTRD 78 >sp|P24341|HXD10_CHICK Homeobox protein Hox-D10 (Chox-4.5) (Chox-4D) Length = 95 Score = 295 (108.9 bits), Expect = 2.6e-26, P = 2.6e-26 Identities = 52/74 (70%), Positives = 64/74 (86%) Query: 190 NNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIW 249 + P SNWL A + RKKRCPYTKHQ LELEKEFLFN YLTR+RR E+++ +NLT+RQVKIW Sbjct: 9 DTPTSNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIW 68 Query: 250 FQNRRMKMKKFNKD 263 FQNRRMK+KK +++ Sbjct: 69 FQNRRMKLKKMSRE 82 >sp|Q8AWY2|HXAAB_BRARE Homeobox protein Hox-A10b (Hox-A10) Length = 330 Score = 295 (108.9 bits), Expect = 2.6e-26, P = 2.6e-26 Identities = 60/116 (51%), Positives = 79/116 (68%) Query: 153 TVATASPVEKDTLSGQAGDVSG-EAEEKP--GLDPSKS--LQNNPVSNWLHASATRKKRC 207 T A +P L G G S E + P + +K+ ++ +NWL A + RKKRC Sbjct: 202 TCAPCAPGRNKELRGSTGTASSPEPPDSPEKAVTVTKAGDSKSESTANWLTAKSGRKKRC 261 Query: 208 PYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 PYTKHQ LELEKEFLFN YLTR+RR E++R ++LT+RQVKIWFQNRRMK+KK +++ Sbjct: 262 PYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSRE 317 >sp|Q1KKV1|HXCAA_FUGRU Homeobox protein Hox-C10a Length = 346 Score = 293 (108.2 bits), Expect = 4.2e-26, P = 4.2e-26 Identities = 51/75 (68%), Positives = 64/75 (85%) Query: 195 NWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRR 254 NWL A + RKKRCPYTKHQ LELEKEFLFN YL+R+RR E++R +NLT+RQVKIWFQNRR Sbjct: 265 NWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKIWFQNRR 324 Query: 255 MKMKKFNKDGAPKDE 269 MK+KK N++ +++ Sbjct: 325 MKLKKLNRESREREQ 339 >sp|P24340|HXD9_CHICK Homeobox protein Hox-D9 (Chox-4.4) Length = 60 Score = 288 (106.4 bits), Expect = 1.4e-25, P = 1.4e-25 Identities = 54/60 (90%), Positives = 57/60 (95%) Query: 202 TRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFN 261 TRKKRCPYTK+Q LELEKEFLFN YLTRDRRYEVAR+LNLTERQVKIWFQNRRMKMKK + Sbjct: 1 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMS 60 >sp|Q1KL16|HXAAA_FUGRU Homeobox protein Hox-A10a Length = 287 Score = 288 (106.4 bits), Expect = 1.4e-25, P = 1.4e-25 Identities = 53/97 (54%), Positives = 70/97 (72%) Query: 167 GQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTY 226 G + D + E E++ + + NWL A + RKKRCPYTKHQ LELEKEFLFN Y Sbjct: 178 GSSADEAEENEDRAATGTKGHSKPDNAGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMY 237 Query: 227 LTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 LTR+RR E+++ ++LT+RQVKIWFQNRRMK+KK ++ Sbjct: 238 LTRERRLEISKSVHLTDRQVKIWFQNRRMKLKKMTRE 274 >sp|Q9PWD6|HXA10_MORSA Homeobox protein Hox-A10 Length = 289 Score = 287 (106.1 bits), Expect = 1.8e-25, P = 1.8e-25 Identities = 86/250 (34%), Positives = 118/250 (47%) Query: 21 EELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVY 80 E+ P+ + L ++R + + S TCT G VP F + + + Sbjct: 45 EQPKCPKASTAEDLTYSRLTTTGLGSS---TCTVTDGGGGGGGGSVPVPGYFRLSQTHAH 101 Query: 81 HHHYGHPQGPVGADTDGRYQSWLLEPMSGSLP--MAGLPTTHHYGIKPE-----GLGTRA 133 H + GP + + P P P T G E G Sbjct: 102 SHKLYNTNGPQPNPSHSHFGLHPTAPARFHTPPTSTSTPATAQEGRNTEEPVSSGNADLQ 161 Query: 134 DGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPV 193 A PG+ A SD V++A E+ QA G+ +KS +N Sbjct: 162 PHAAPGTEEARESSD---AEVSSADETEEHDKERQAKSTKGD---------TKS-ENT-- 206 Query: 194 SNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNR 253 +NWL A + RKKRCPYTKHQ LELEKEFLFN YLTR+RR E+++ ++LT+RQVKIWFQNR Sbjct: 207 ANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNR 266 Query: 254 RMKMKKFNKD 263 RMK+KK ++ Sbjct: 267 RMKLKKMTRE 276 >sp|Q1KL17|HXABA_FUGRU Homeobox protein Hox-A11a Length = 283 Score = 249 (92.7 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25 Identities = 49/117 (41%), Positives = 75/117 (64%) Query: 147 SDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKR 206 S NG +P ++ + + + + E K +P + + +S+ TRKKR Sbjct: 161 SSSTNGFSGDKTPTKQPSSAPEDAQACRDTEAK---EPREESSSPELSS--DGQRTRKKR 215 Query: 207 CPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 CPY+K+QI ELE+EF F+ Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 216 CPYSKYQIRELEREFFFSVYINKEKRMQLSRMLNLTDRQVKIWFQNRRMKEKKLNRD 272 Score = 50 (22.7 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25 Identities = 8/24 (33%), Positives = 12/24 (50%) Query: 73 PGTVSSVYHHHYGHPQGPVGADTD 96 P ++ YHHH+ H A T+ Sbjct: 109 PAAAAAAYHHHHHHHTSASSAATN 132 >sp|Q9DDU0|HXABA_BRARE Homeobox protein Hox-A11a Length = 284 Score = 258 (95.9 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25 Identities = 60/144 (41%), Positives = 84/144 (58%) Query: 123 GIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGL 182 G+ P+ D A GS + ++ +DYA +S K + A + E +E+P Sbjct: 134 GVLPQAFDQFFDTAYGGSDS-VVDNDYAARDKMHSS---KQSTPAPAPEQQPEGKERPET 189 Query: 183 D-PSKSLQNNP--VSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLL 239 P S NN S RKKRCPYTK QI ELE+EF F+ Y+ +++R +++R+L Sbjct: 190 SSPESSSGNNEEKTSGANSGPRFRKKRCPYTKFQIRELEREFFFSVYINKEKRLQLSRML 249 Query: 240 NLTERQVKIWFQNRRMKMKKFNKD 263 NLT+RQVK+WFQNRRMK KK N+D Sbjct: 250 NLTDRQVKMWFQNRRMKEKKLNRD 273 Score = 38 (18.4 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25 Identities = 12/37 (32%), Positives = 18/37 (48%) Query: 49 LGTCTFPSKPPVFG---PSWSHVPAQFPGTVSSVYHH 82 L C +PS+ V P+ + V FP +S Y+H Sbjct: 80 LAHC-YPSEDSVHKECLPAVTTVGEMFPKNNASAYYH 115 >sp|Q1KKV2|HXCBA_FUGRU Homeobox protein Hox-C11a Length = 322 Score = 249 (92.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24 Identities = 53/115 (46%), Positives = 74/115 (64%) Query: 151 NGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASA--TRKKRCP 208 + +A AS EKD + SG P+ + + N + H+S TRKKRCP Sbjct: 201 SAALAGASEQEKDPGDEEEQTNSGSCSTS---SPAATKEGNAGKS-SHSSTPRTRKKRCP 256 Query: 209 YTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 Y+K QI ELE+EF FN Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK ++D Sbjct: 257 YSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 311 Score = 45 (20.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24 Identities = 7/13 (53%), Positives = 10/13 (76%) Query: 75 TVSSVYHHHYGHP 87 +V S +HHH+ HP Sbjct: 120 SVYSHHHHHHTHP 132 >sp|Q58EL0|HXCBA_BRARE Homeobox protein Hox-C11a Length = 306 Score = 244 (91.0 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24 Identities = 47/91 (51%), Positives = 64/91 (70%) Query: 175 EAEEKPGLDPSKSLQNNPVSNWLHASA--TRKKRCPYTKHQILELEKEFLFNTYLTRDRR 232 E G S + ++ S H+S TRKKRCPY+K QI ELE+EF FN Y+ +++R Sbjct: 205 EEHTNSGSCTSAATKDGNASKSSHSSTPRTRKKRCPYSKFQIRELEREFFFNVYINKEKR 264 Query: 233 YEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 +++R+LNLT+RQVKIWFQNRRMK KK ++D Sbjct: 265 LQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 295 Score = 42 (19.8 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24 Identities = 8/11 (72%), Positives = 8/11 (72%) Query: 78 SVY-HHHYGHP 87 SVY HHH HP Sbjct: 121 SVYSHHHQHHP 131 >sp|Q9DDU1|HXABB_BRARE Homeobox protein Hox-A11b (Hox-A11) Length = 283 Score = 269 (99.8 bits), Expect = 1.5e-23, P = 1.5e-23 Identities = 51/105 (48%), Positives = 70/105 (66%) Query: 159 PVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELE 218 P E + S + D + EE +PS + S + TRKKRCPYTK+QI ELE Sbjct: 168 PAESGSDSCRGTDETERCEETSSPEPSSGNNEDKFSGSSNGQKTRKKRCPYTKYQIRELE 227 Query: 219 KEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 +EF F+ Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 228 REFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRD 272 >sp|Q9DDU2|HXABB_DANAE Homeobox protein Hox-A11b Length = 283 Score = 268 (99.4 bits), Expect = 1.9e-23, P = 1.9e-23 Identities = 51/105 (48%), Positives = 69/105 (65%) Query: 159 PVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELE 218 P E + S + D + EE +PS S + TRKKRCPYTK+QI ELE Sbjct: 168 PAESGSDSCRGTDETERCEETSSPEPSSGNNEEKFSGSSNGQKTRKKRCPYTKYQIRELE 227 Query: 219 KEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 +EF F+ Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 228 REFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRD 272 >sp|P31270|HXA11_HUMAN Homeobox protein Hox-A11 (Hox-1I) Length = 313 Score = 263 (97.6 bits), Expect = 6.3e-23, P = 6.3e-23 Identities = 80/218 (36%), Positives = 109/218 (50%) Query: 63 PSWSHVPAQFPGTVSS-VYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHH 121 PS + VP S+ VYHH P A + Y + +G LP A Sbjct: 97 PSAAGVPGDVLAKSSANVYHH-------PTPAVSSNFYST---VGRNGVLPQAFDQFFET 146 Query: 122 -YGIKPEGLGTR---ADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAG---DVSG 174 YG PE L + D + A + A AT +P + SG G + + Sbjct: 147 AYGT-PENLASSDYPGDKSAEKGPPAATATSAAAAAAATGAPATSSSDSGGGGGCRETAA 205 Query: 175 EAEEKPGLDPSKSLQNNPVSNWLHAS---------ATRKKRCPYTKHQILELEKEFLFNT 225 AEEK +S ++P S+ H TRKKRCPYTK+QI ELE+EF F+ Sbjct: 206 AAEEKERRRRPES-SSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSV 264 Query: 226 YLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 265 YINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINRD 302 >sp|P31311|HXA11_MOUSE Homeobox protein Hox-A11 (Hox-1.9) Length = 313 Score = 262 (97.3 bits), Expect = 8.0e-23, P = 8.0e-23 Identities = 82/217 (37%), Positives = 107/217 (49%) Query: 63 PSWSHVPAQFPGTVSS-VYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHH 121 PS + VP S+ VYHH P A + Y + +G LP A Sbjct: 98 PSAAGVPGDVLAKSSANVYHH-------PTPAVSSNFYST---VGRNGVLPQAFDQFFET 147 Query: 122 -YGIKPEGLGTR---AD-GALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVS-GE 175 YG PE L + D A G A S A AT +P + G G Sbjct: 148 AYGT-PENLASSDYPGDKNAEKGPQAAAATSAAAVAAAATGAPATSSSDGGGGGGCQEAA 206 Query: 176 AEEKPGLDPSKSLQNNPVSNWLHAS---------ATRKKRCPYTKHQILELEKEFLFNTY 226 AEEK +S ++P S+ H TRKKRCPYTK+QI ELE+EF F+ Y Sbjct: 207 AEEKERRRRPES-SSSPESSSGHTEDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVY 265 Query: 227 LTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 + +++R +++R+LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 266 INKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINRD 302 >sp|Q9IA15|HXD11_HETFR Homeobox protein Hox-D11 Length = 265 Score = 258 (95.9 bits), Expect = 2.1e-22, P = 2.1e-22 Identities = 62/150 (41%), Positives = 88/150 (58%) Query: 118 TTHHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQ--AGDVSGE 175 T GI P+G + A S + S+Y T + S + T S + +G Sbjct: 112 TVGRNGILPQGFDQFFETAYGISDS----SNYEQLTEKSVSTCQSITASEKVSSGQEKES 167 Query: 176 AEEKPGLDPS--KSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRY 233 A EK ++ S + + N +S L RKKRCPYTK+QI ELE+EF FN Y+ +++R Sbjct: 168 ATEKSTVESSGTSATEKNSLSTALRC---RKKRCPYTKYQIRELEREFFFNVYINKEKRL 224 Query: 234 EVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 +++R+LNLT+RQVKIWFQNRRMK KK ++D Sbjct: 225 QLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 254 >sp|Q1KKT1|HXDBA_FUGRU Homeobox protein Hox-D11a Length = 265 Score = 258 (95.9 bits), Expect = 2.1e-22, P = 2.1e-22 Identities = 60/146 (41%), Positives = 85/146 (58%) Query: 130 GTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSG-------EAEEKP-- 180 G +G LP L D +TA P+++ T G +GD E E K Sbjct: 111 GIGRNGVLPQGFDQFL--DAPTSDKSTAEPLKQKTDCGVSGDTGSHRQALTKEDEHKDEV 168 Query: 181 --GLDPSKSLQNNPVSNWLHA-SATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVAR 237 G++ S +N + S +RKKRCPY+K+QI ELE+EF FN Y+ +++R +++R Sbjct: 169 IGGVEEDSSSNCGDNNNQQNPPSRSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSR 228 Query: 238 LLNLTERQVKIWFQNRRMKMKKFNKD 263 +LNL++RQVKIWFQNRRMK KK N+D Sbjct: 229 MLNLSDRQVKIWFQNRRMKEKKLNRD 254 >sp|P31273|HXC8_HUMAN Homeobox protein Hox-C8 (Hox-3A) Length = 242 Score = 233 (87.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22 Identities = 61/123 (49%), Positives = 70/123 (56%) Query: 152 GTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWL--HASATRKKRCPY 209 G AS V+ A S E + + S SL P W+ HA R R Y Sbjct: 101 GAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMF-P---WMRPHAPGRRSGRQTY 156 Query: 210 TKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFN-KDGAP-- 266 +++Q LELEKEFLFN YLTR RR EV+ L LTERQVKIWFQNRRMK KK N KD P Sbjct: 157 SRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGA 216 Query: 267 KDE 269 +DE Sbjct: 217 RDE 219 Score = 38 (18.4 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22 Identities = 10/22 (45%), Positives = 11/22 (50%) Query: 30 SGPGLQHARQSASISDHSELGT 51 S PG QHA S + D GT Sbjct: 45 SAPGFQHA--SHHVQDFFHHGT 64 >sp|P09025|HXC8_MOUSE Homeobox protein Hox-C8 (Hox-3.1) (M31) Length = 242 Score = 233 (87.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22 Identities = 61/123 (49%), Positives = 70/123 (56%) Query: 152 GTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWL--HASATRKKRCPY 209 G AS V+ A S E + + S SL P W+ HA R R Y Sbjct: 101 GAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMF-P---WMRPHAPGRRSGRQTY 156 Query: 210 TKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFN-KDGAP-- 266 +++Q LELEKEFLFN YLTR RR EV+ L LTERQVKIWFQNRRMK KK N KD P Sbjct: 157 SRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGA 216 Query: 267 KDE 269 +DE Sbjct: 217 RDE 219 Score = 38 (18.4 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22 Identities = 10/22 (45%), Positives = 11/22 (50%) Query: 30 SGPGLQHARQSASISDHSELGT 51 S PG QHA S + D GT Sbjct: 45 SAPGFQHA--SHHVQDFFHHGT 64 >sp|Q9IA12|HXD8_HETFR Homeobox protein Hox-D8 Length = 240 Score = 218 (81.8 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22 Identities = 51/93 (54%), Positives = 59/93 (63%) Query: 181 GLDPSKSLQNNPVSN---WLHASAT---RKKRCPYTKHQILELEKEFLFNTYLTRDRRYE 234 G +P QN+ + W+ A R+ R Y++ Q LELEKEFLFN YLTR RR E Sbjct: 120 GEEPEHLNQNSSPTQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIE 179 Query: 235 VARLLNLTERQVKIWFQNRRMKMKKFN-KDGAP 266 V+ L LTERQVKIWFQNRRMK KK N KD P Sbjct: 180 VSHALGLTERQVKIWFQNRRMKWKKENNKDKFP 212 Score = 53 (23.7 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22 Identities = 16/44 (36%), Positives = 18/44 (40%) Query: 60 VFGPSWSHVPAQFPGTVSSVYHH------HYGHPQGPVGADTDG 97 V+GPS S Q P V YHH + G Q P G G Sbjct: 39 VYGPS-SGASFQHPAQVQDFYHHGTSALPNTGFQQNPCGITCHG 81 >sp|P31277|HXD11_HUMAN Homeobox protein Hox-D11 (Hox-4F) Length = 338 Score = 256 (95.2 bits), Expect = 3.5e-22, P = 3.5e-22 Identities = 69/187 (36%), Positives = 98/187 (52%) Query: 85 GHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHHYGIKPEGLGTRADGALPGSHTAL 144 G P GP GA ++ + S + +G LP G + P G + P H+ + Sbjct: 152 GPPHGPAGAASN--FYSAV--GRNGILPQ-GFDQFYEAAPGPPFAGPQPRRH-PRRHSPM 205 Query: 145 LLSDYANGTVATA----SPVEKDTLS----GQAGDVSGEAEEKPGLDPSKSLQNNPVSNW 196 +D + SP K T G A G+ E PG + ++ V+ Sbjct: 206 GAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEGSGGDGEGPPG-EAGAEKSSSAVA-- 262 Query: 197 LHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMK 256 +RKKRCPYTK+QI ELE+EF FN Y+ +++R +++R+LNLT+RQVKIWFQNRRMK Sbjct: 263 --PQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMK 320 Query: 257 MKKFNKD 263 KK N+D Sbjct: 321 EKKLNRD 327 >sp|Q9YH13|HXC8_CHICK Homeobox protein Hox-C8 (cHoxc-8) Length = 242 Score = 228 (85.3 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22 Identities = 50/79 (63%), Positives = 56/79 (70%) Query: 196 WL--HASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNR 253 W+ HA R R Y+++Q LELEKEFLFN YLTR RR EV+ L LTERQVKIWFQNR Sbjct: 141 WMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 200 Query: 254 RMKMKKFN-KDGAP--KDE 269 RMK KK N KD P +DE Sbjct: 201 RMKWKKENNKDKLPGARDE 219 Score = 42 (19.8 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22 Identities = 12/37 (32%), Positives = 14/37 (37%) Query: 52 CTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHYGHPQ 88 C FP S SH PGT + + H H Q Sbjct: 26 CRFPQSV-----SRSHALVYGPGTTAPTFQHPSHHVQ 57 >sp|O13074|HXB4A_FUGRU Homeobox protein Hox-B4a (FrHOXB-4) Length = 288 Score = 208 (78.3 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22 Identities = 46/100 (46%), Positives = 59/100 (59%) Query: 164 TLSGQAGDVSGEAEEKPGLDP-SKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFL 222 T Q + P + P K + N VS+ ++ R YT+ Q+LELEKEF Sbjct: 121 TPHSQGASSPASTRKDPVVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFH 180 Query: 223 FNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNK 262 +N YLTR RR E+A L L+ERQ+KIWFQNRRMK KK +K Sbjct: 181 YNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 220 Score = 62 (26.9 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22 Identities = 22/69 (31%), Positives = 29/69 (42%) Query: 55 PSKPPVFGPSWSHVPAQFPGTVSSVYHHHYGHPQGPVGADTD----GRYQSWLLEPMSGS 110 P+ P + S PA F S+YHHH Q T G+ S ++ P Sbjct: 30 PNHSPDYYSSQRQEPAAFQP--DSLYHHHPHQQQRAEPPYTQCQRAGQPASVVMSPRGHV 87 Query: 111 LPMAGLPTT 119 LP +GL TT Sbjct: 88 LPPSGLQTT 96 >sp|P23813|HXD11_MOUSE Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5) Length = 323 Score = 254 (94.5 bits), Expect = 5.7e-22, P = 5.7e-22 Identities = 58/139 (41%), Positives = 80/139 (57%) Query: 125 KPEGLGTRADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDP 184 +PEG + D PG+ A A+P + + + G GE E PG + Sbjct: 188 QPEGAADKGDPK-PGAGGG------GGSPCAKATPGPEPKGAAEGG--GGEGEGPPG-EA 237 Query: 185 SKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTER 244 V+ +RKKRCPYTK+QI ELE+EF FN Y+ +++R +++R+LNLT+R Sbjct: 238 GAEKSGGTVA----PQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDR 293 Query: 245 QVKIWFQNRRMKMKKFNKD 263 QVKIWFQNRRMK KK N+D Sbjct: 294 QVKIWFQNRRMKEKKLNRD 312 >sp|Q1KKZ5|HXABB_FUGRU Homeobox protein Hox-A11b Length = 284 Score = 253 (94.1 bits), Expect = 7.2e-22, P = 7.2e-22 Identities = 62/145 (42%), Positives = 82/145 (56%) Query: 123 GIKPEGLGTRAD---GALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEA-EE 178 G+ P+ D G+ GS T + A+ A SP S QAG S E+ Sbjct: 138 GVLPQAFDQFFDTAYGSSEGSATPTAHAADADRQAAKTSPA-----SAQAGSDSAESFSP 192 Query: 179 KPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARL 238 K S+ Q S RKKRCPYTK+QI ELE+EF F+ Y+ +++R +++R+ Sbjct: 193 KSSSGHSEEKQ----SRGSGGQRARKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRM 248 Query: 239 LNLTERQVKIWFQNRRMKMKKFNKD 263 LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 249 LNLTDRQVKIWFQNRRMKEKKLNRD 273 >sp|Q9PWD4|HXA7_MORSA Homeobox protein Hox-A7 Length = 225 Score = 214 (80.4 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22 Identities = 47/82 (57%), Positives = 58/82 (70%) Query: 184 PSKSLQNNPVSNWLHAS-ATRKK-RCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNL 241 P K + P W+ AS TRK+ R Y+++Q LELEKEF FN YLTR RR E+A L L Sbjct: 109 PDKQYRMYP---WMRASDPTRKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 165 Query: 242 TERQVKIWFQNRRMKMKKFNKD 263 +ERQ+KIWFQNRRMK KK +K+ Sbjct: 166 SERQIKIWFQNRRMKWKKDHKE 187 Score = 53 (23.7 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22 Identities = 14/40 (35%), Positives = 19/40 (47%) Query: 5 GTLTSYYVDSLILPESEELSVPRYPSGPGLQHARQSASIS 44 G L+ Y S + P E S PSG AR +A+I+ Sbjct: 8 GLLSKYTAGSSLFPNVERASCSIGPSGEDYGSARTTAAIA 47 >sp|P31263|HXD11_NOTVI Homeobox protein Hox-D11 (NvHox-2) Length = 277 Score = 251 (93.4 bits), Expect = 1.2e-21, P = 1.2e-21 Identities = 55/108 (50%), Positives = 70/108 (64%) Query: 156 TASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQIL 215 T SP +K G+A SGE D S S P +RKKRCPYTK+QI Sbjct: 171 THSPDKKMGAEGRADSPSGEV----AADKSNS-SATP-------QRSRKKRCPYTKYQIR 218 Query: 216 ELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 ELE+EF FN Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK N+D Sbjct: 219 ELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRD 266 >sp|P70118|IPF1_MESAU Insulin promoter factor 1 (IPF-1) (Homeodomain protein PDX1) Length = 283 Score = 204 (76.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21 Identities = 38/57 (66%), Positives = 47/57 (82%) Query: 203 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 259 ++ R YT+ Q+LELEKEFLFN Y++R RR E+A +LNLTER +KIWFQNRRMK KK Sbjct: 147 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK 203 Score = 61 (26.5 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21 Identities = 27/87 (31%), Positives = 36/87 (41%) Query: 49 LGTCTFPSKPPVFGPSWSHVP--AQFPGTVSSVYHH---HYGHPQGPVGADTDGRYQSWL 103 LGT S PP P VP A+ P V+ ++HH G P G +G L Sbjct: 54 LGTLEQGS-PPDISPY--EVPPLAEDPA-VAHLHHHLPAQLGLAHPPSGPFPNGTEPGGL 109 Query: 104 LEPMSGSLPMAGLPTTHHYGIKPEGLG 130 EP G LP + +T + K + G Sbjct: 110 EEPSRGQLPFPWMKSTKAHAWKGQWAG 136 >sp|O43248|HXC11_HUMAN Homeobox protein Hox-C11 Length = 304 Score = 248 (92.4 bits), Expect = 2.4e-21, P = 2.4e-21 Identities = 54/113 (47%), Positives = 72/113 (63%) Query: 157 ASPVEKDTLSGQAGDVSGEAEEKPGLDPSKS-----LQNNPVSNWL-HASATRKKRCPYT 210 A P +AG EAEE+ +PS S + P +A TRKKRCPY+ Sbjct: 183 APPASGLASRAEAG-AEAEAEEE-NTNPSSSGSAHSVAKEPAKGAAPNAPRTRKKRCPYS 240 Query: 211 KHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 K QI ELE+EF FN Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK ++D Sbjct: 241 KFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 293 >sp|P24342|HXD11_CHICK Homeobox protein Hox-D11 (Chox-4.6) (GHOX-4.6) (Chox-4E) Length = 280 Score = 246 (91.7 bits), Expect = 4.0e-21, P = 4.0e-21 Identities = 42/62 (67%), Positives = 55/62 (88%) Query: 202 TRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFN 261 +RKKRCPYTK+QI ELE+EF FN Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK N Sbjct: 208 SRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLN 267 Query: 262 KD 263 +D Sbjct: 268 RD 269 >sp|Q90470|HXDBA_BRARE Homeobox protein Hox-D11a (Hox-D11) (Hox-C11) Length = 276 Score = 246 (91.7 bits), Expect = 4.0e-21, P = 4.0e-21 Identities = 55/144 (38%), Positives = 83/144 (57%) Query: 123 GIKPEGLGT---RADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEK 179 G+ P+G A+ P + D + A +P D+ D + EE+ Sbjct: 127 GVLPQGFDQFFETANSEKPNPEQSKQKPDTSVPGDAACNP-STDSAEQTKQDPTDTVEEE 185 Query: 180 PGLDPSKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLL 239 + +N+ S A+ +RKKRCPY+K+QI ELE+EF FN Y+ +++R +++R+L Sbjct: 186 SSVSTCDEEKNSGSS----ATKSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRML 241 Query: 240 NLTERQVKIWFQNRRMKMKKFNKD 263 +LT+RQVKIWFQNRRMK KK N+D Sbjct: 242 SLTDRQVKIWFQNRRMKEKKLNRD 265 >sp|P49639|HXA1_HUMAN Homeobox protein Hox-A1 (Hox-1F) Length = 335 Score = 212 (79.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21 Identities = 62/179 (34%), Positives = 84/179 (46%) Query: 93 ADTDGRYQSWLLEPMSGSLPMAGLPTTHHY-GIKPEGLGTRA--DGALPGSHTALLLSDY 149 AD G Y SG+L + HH+ G +G+ + H +L L+ Y Sbjct: 117 ADVSGGYPQCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATY 176 Query: 150 ANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNP----VSNWLHASATRKK 205 N +++ ++ A + S A+ D K +N P V + + Sbjct: 177 -NNSLSPLHASHQEACRSPASETSSPAQT---FDWMKVKRNPPKTGKVGEYGYLGQPNAV 232 Query: 206 RCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 264 R +T Q+ ELEKEF FN YLTR RR E+A L L E QVKIWFQNRRMK KK K+G Sbjct: 233 RTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEG 291 Score = 51 (23.0 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21 Identities = 9/18 (50%), Positives = 11/18 (61%) Query: 80 YHHHYGHPQGPVGADTDG 97 +HHH+ HPQ P T G Sbjct: 68 HHHHHHHPQ-PATYQTSG 84 >sp|Q9IA23|HXA5_HETFR Homeobox protein Hox-A5 Length = 275 Score = 245 (91.3 bits), Expect = 5.1e-21, P = 5.1e-21 Identities = 83/267 (31%), Positives = 123/267 (46%) Query: 7 LTSYYVDSLI--LPESEELSVPRYPSGPGLQHARQSASISDHSELGTCTFPSKPPVFGPS 64 ++SY+V+S P + + Y + + ++ S G + P+ Sbjct: 1 MSSYFVNSFCGRYPNGPDYQLHNYGDHSSVSEQYRDSATMHSSRYGYGYNGMDLSISRPA 60 Query: 65 WSHVPAQFPGTVSSVYHHHYGHPQGP-VGADTDGRY-QSWLLEPMSGSLPMAGL--PTT- 119 +H A S GP GADT RY Q P LP + + P+ Sbjct: 61 SNHFNASERSRSYSAAAATTAAAAGPEAGADT--RYNQPATSSPSPDPLPCSAVVSPSAG 118 Query: 120 -HHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVATA--SPVEKDTLSGQAGDVSGEA 176 +H+GIK + + + S ++ + D + T +P D S Q G + A Sbjct: 119 DNHHGIK-NSIASPTTSSNSSSSSSHISRDGVGTSPGTEDDTPASSDPPSSQNGQST--A 175 Query: 177 EEKPGLDP-SKSLQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEV 235 +++P + P + L + S + ++ R YT++Q LELEKEF FN YLTR RR E+ Sbjct: 176 QQQPQIYPWMRKLHISHDS--MGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 233 Query: 236 ARLLNLTERQVKIWFQNRRMKMKKFNK 262 A L LTERQ+KIWFQNRRMK KK NK Sbjct: 234 AHALCLTERQIKIWFQNRRMKWKKDNK 260 >sp|P09087|ABDB_DROME Homeobox protein abdominal-B (P3) (Infraabdominal 7) (IAB-7) (PH189) Length = 493 Score = 229 (85.7 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21 Identities = 45/70 (64%), Positives = 54/70 (77%) Query: 191 NP-VSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIW 249 NP + W + RKKR PY+K Q LELEKEFLFN Y+++ +R+E+AR L LTERQVKIW Sbjct: 375 NPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIW 434 Query: 250 FQNRRMKMKK 259 FQNRRMK KK Sbjct: 435 FQNRRMKNKK 444 Score = 44 (20.5 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21 Identities = 7/21 (33%), Positives = 9/21 (42%) Query: 67 HVPAQFPGTVSSVYHHHYGHP 87 H P + + HHH HP Sbjct: 34 HAHHHLPQPLHTTSHHHSAHP 54 Score = 38 (18.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20 Identities = 10/32 (31%), Positives = 16/32 (50%) Query: 18 PESEELSVPRYPSGPGLQHARQSASISDHSEL 49 P + LS + P+GP Q +Q + H +L Sbjct: 137 PVAGALSPAQTPTGPSAQQ-QQHLTSPHHQQL 167 >sp|Q24645|ANTP_DROSU Homeotic protein antennapedia Length = 394 Score = 214 (80.4 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21 Identities = 51/105 (48%), Positives = 64/105 (60%) Query: 170 GDVSGEAEEKPGLDPSKSLQN--NPVSNWLHAS----ATRKK-RCPYTKHQILELEKEFL 222 G + G+ P +P+ +P+ W+ + RK+ R YT++Q LELEKEF Sbjct: 275 GHLPGQ-HTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFH 333 Query: 223 FNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD-GAP 266 FN YLTR RR E+A L LTERQ+KIWFQNRRMK KK NK G P Sbjct: 334 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEP 378 Score = 54 (24.1 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21 Identities = 23/73 (31%), Positives = 28/73 (38%) Query: 82 HHYGHPQGPVG------ADTDGRYQSWLLEPMSGS----LPMAGLP--TTHHYGIKPEGL 129 HH GHPQ +G D +Q+ M G +P G P H G P + Sbjct: 213 HHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYGQQQTGVPPVGAPPQAMMHQGQGPPQM 272 Query: 130 GTRADGALPGSHT 142 G LPG HT Sbjct: 273 H---QGHLPGQHT 282 Score = 38 (18.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19 Identities = 14/76 (18%), Positives = 24/76 (31%) Query: 67 HVPAQFPGTVSSVYHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHHYGIKP 126 H P + + HHY G R+ + P M H +P Sbjct: 28 HYPGNGVTDLDAQQMHHYSQNPNHQGNMPYPRFPPYDRMPYYNGQGMDQQQQQHQGYSRP 87 Query: 127 EGLGTRADGALPGSHT 142 + ++ G +P + T Sbjct: 88 DSPSSQVGGVMPQAQT 103 >sp|P31313|HXC11_MOUSE Homeobox protein Hox-C11 (Hox-3.7) Length = 304 Score = 244 (91.0 bits), Expect = 6.5e-21, P = 6.5e-21 Identities = 54/113 (47%), Positives = 72/113 (63%) Query: 157 ASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNN-----PVSNWL-HASATRKKRCPYT 210 A P +AG EAEE+ +PS S ++ P A TRKKRCPY+ Sbjct: 183 APPASGLASRAEAG-AEAEAEEE-NTNPSSSGSSHSATKEPAKGAAPDAPRTRKKRCPYS 240 Query: 211 KHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 K QI ELE+EF FN Y+ +++R +++R+LNLT+RQVKIWFQNRRMK KK ++D Sbjct: 241 KFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 293 >sp|P13545|HMB1_STRPU Homeobox protein HB1 (SPHBOX1) Length = 308 Score = 214 (80.4 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21 Identities = 48/90 (53%), Positives = 58/90 (64%) Query: 182 LDPSKSLQNNPVSNWLHASATR------KKRC--PYTKHQILELEKEFLFNTYLTRDRRY 233 + P KS P W+ S +KRC YT++Q LELEKEF FN YLTR RR Sbjct: 165 MSPCKSTSGYP---WMPVSGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRI 221 Query: 234 EVARLLNLTERQVKIWFQNRRMKMKKFNKD 263 E++ LL LTERQ+KIWFQNRRMK KK +K+ Sbjct: 222 ELSHLLGLTERQIKIWFQNRRMKYKKESKN 251 Score = 44 (20.5 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21 Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 59 PVFGPSWSHVPAQFPGTVSSVY 80 P F P++ H QF T S Y Sbjct: 10 PAFFPTYPHAGEQFYATPSGSY 31 Score = 41 (19.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20 Identities = 13/41 (31%), Positives = 17/41 (41%) Query: 32 PGLQHARQS--ASISDHSELGTCTFPSKPPVFGPSWSHVPA 70 P HA + A+ S EL +C F P S S P+ Sbjct: 14 PTYPHAGEQFYATPSGSYELSSCAFSKNPKTSSYSSSSSPS 54 >sp|P17277|HXA4_CHICK Homeobox protein Hox-A4 (Chox-1.4) Length = 309 Score = 209 (78.6 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21 Identities = 65/178 (36%), Positives = 86/178 (48%) Query: 86 HPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHHYGIKPEGLGTRADGALPGSHTALL 145 +PQ P + G +P G+ P P H G P A LPG H Sbjct: 104 YPQAPYSYSSAGSAAPGPEQPPPGASPPPPPPAKGHPG--P------AQPLLPG-HALQR 154 Query: 146 LSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDP-SKSLQNNPVSNWLHASATRK 204 + A A P L ++ + G ++P + P K + + V+ ++ Sbjct: 155 RCEAAPAAGAGTGP-GCALLPDKS--LPGLKGKEPVVYPWMKKIHVSTVNPNYSGGEPKR 211 Query: 205 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNK 262 R YT+ Q+LELEKEF FN YLTR RR E+A L L+ERQVKIWFQNRRMK KK +K Sbjct: 212 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 269 Score = 49 (22.3 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21 Identities = 10/32 (31%), Positives = 13/32 (40%) Query: 59 PVFGPSWSHVPAQFPGTVSSVYHHHYGHPQGP 90 P F P + S+ YH H+ HP P Sbjct: 15 PKFPPCEEYTQHSGSAGSSASYHPHHPHPHAP 46 >sp|P18864|HXB7_RAT Homeobox protein Hox-B7 (Homeobox protein R1B) Length = 219 Score = 243 (90.6 bits), Expect = 8.3e-21, P = 8.3e-21 Identities = 56/113 (49%), Positives = 72/113 (63%) Query: 158 SPVEKDTLSGQA-GDVSGEAEEKPGLDPSKSLQNN-PVSNWLHASATRKKRC--PYTKHQ 213 +P E++ LSG GD + A K D + ++N + W+ +S T +KR YT++Q Sbjct: 90 APFEQN-LSGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTERKRGRQTYTRYQ 148 Query: 214 ILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAP 266 LELEKEF +N YLTR RR E+A L LTERQ+KIWFQNRRMK KK NK P Sbjct: 149 TLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTSGP 201 >sp|Q6B3N0|HXA5_CHICK Homeobox protein Hox-A5 Length = 270 Score = 242 (90.2 bits), Expect = 1.1e-20, P = 1.1e-20 Identities = 87/258 (33%), Positives = 120/258 (46%) Query: 27 RYPSGPGLQ-HARQSASISDHSELGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHYG 85 RYP+GP Q H + DHS + + + + + +V H+G Sbjct: 12 RYPNGPDYQLH-----NYGDHSSVSE-QYRDSASMHSGRYGYGYNGMDLSVGRSASTHFG 65 Query: 86 -------HPQGPVGADTDGRY-QSWLLE--PMSGSLP---MAGLPTTH-HYGIKPEGLGT 131 +P A T+ RY QS P LP +A P + H+G+K LG Sbjct: 66 ASERARTYPANSTSASTEPRYSQSAAASHSPPPDPLPCTAVAASPVSESHHGVK-NSLGN 124 Query: 132 RADGALPGSHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNN 191 + + S + + D G V T+S E+DT + S +++ PS+ Q Sbjct: 125 SSSTSSNSSSSTHISRD---G-VGTSSGTEEDT-PASSEQASAPSDQSTA-QPSQP-QIY 177 Query: 192 PVSNWLHASAT-------RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTER 244 P LH S ++ R YT++Q LELEKEF FN YLTR RR E+A L L+ER Sbjct: 178 PWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSER 237 Query: 245 QVKIWFQNRRMKMKKFNK 262 Q+KIWFQNRRMK KK NK Sbjct: 238 QIKIWFQNRRMKWKKDNK 255 >sp|Q1KKX9|HXB5A_FUGRU Homeobox protein Hox-B5a Length = 319 Score = 217 (81.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20 Identities = 50/105 (47%), Positives = 63/105 (60%) Query: 160 VEKDTLSGQAGDVSGEAEEKPGLDPS--KSLQNNPVSNWLHASATRKKRCPYTKHQILEL 217 V+K G AG +G G P ++ +S+ + ++ R YT++Q LEL Sbjct: 201 VQKQE-GGPAGAAAGNTVGSEGQPPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLEL 259 Query: 218 EKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNK 262 EKEF FN YLTR RR E+A L LTERQ+KIWFQNRRMK KK NK Sbjct: 260 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDNK 304 Score = 39 (18.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20 Identities = 8/16 (50%), Positives = 9/16 (56%) Query: 27 RYPSGPGLQHARQSAS 42 RYP+GP Q AS Sbjct: 12 RYPNGPDYQLLNYGAS 27 >sp|P09629|HXB7_HUMAN Homeobox protein Hox-B7 (Hox-2C) (HHO.C1) Length = 217 Score = 241 (89.9 bits), Expect = 1.4e-20, P = 1.4e-20 Identities = 56/113 (49%), Positives = 72/113 (63%) Query: 158 SPVEKDTLSGQA-GDVSGEAEEKPGLDPSKSLQNN-PVSNWLHASATRKKRC--PYTKHQ 213 +P E++ LSG GD + A K D + ++N + W+ +S T +KR YT++Q Sbjct: 90 APFEQN-LSGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQ 148 Query: 214 ILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAP 266 LELEKEF +N YLTR RR E+A L LTERQ+KIWFQNRRMK KK NK P Sbjct: 149 TLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGP 201 >sp|Q9TT89|HXB7_BOVIN Homeobox protein Hox-B7 Length = 217 Score = 241 (89.9 bits), Expect = 1.4e-20, P = 1.4e-20 Identities = 56/113 (49%), Positives = 72/113 (63%) Query: 158 SPVEKDTLSGQA-GDVSGEAEEKPGLDPSKSLQNN-PVSNWLHASATRKKRC--PYTKHQ 213 +P E++ LSG GD + A K D + ++N + W+ +S T +KR YT++Q Sbjct: 90 APFEQN-LSGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQ 148 Query: 214 ILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAP 266 LELEKEF +N YLTR RR E+A L LTERQ+KIWFQNRRMK KK NK P Sbjct: 149 TLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTSGP 201 >sp|P52945|IPF1_HUMAN Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX-1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose-sensitive factor) (GSF) Length = 283 Score = 204 (76.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20 Identities = 38/57 (66%), Positives = 47/57 (82%) Query: 203 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 259 ++ R YT+ Q+LELEKEFLFN Y++R RR E+A +LNLTER +KIWFQNRRMK KK Sbjct: 147 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK 203 Score = 51 (23.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20 Identities = 19/76 (25%), Positives = 28/76 (36%) Query: 58 PPVFGPSWSHVPAQFPGTVSSVYHH---HYGHPQGPVGADTDGRYQSWLLEPMSGSLPMA 114 PP P + P V+ ++HH P P G +G L EP LP Sbjct: 62 PPDISP-YEVPPLADDPAVAHLHHHLPAQLALPHPPAGPFPEGAEPGVLEEPNRVQLPFP 120 Query: 115 GLPTTHHYGIKPEGLG 130 + +T + K + G Sbjct: 121 WMKSTKAHAWKGQWAG 136 >sp|P52947|IPF1_RAT Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) Length = 283 Score = 204 (76.9 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20 Identities = 38/57 (66%), Positives = 47/57 (82%) Query: 203 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 259 ++ R YT+ Q+LELEKEFLFN Y++R RR E+A +LNLTER +KIWFQNRRMK KK Sbjct: 147 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK 203 Score = 50 (22.7 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20 Identities = 25/88 (28%), Positives = 31/88 (35%) Query: 49 LGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHY------GHPQGPVGADTDGRYQSW 102 LGT S PP P VP + HHH HP P G +G Sbjct: 54 LGTLEQGS-PPDISPY--EVPPLADDPAGAHLHHHLPAQLGLAHP--PPGPFPNGTETGG 108 Query: 103 LLEPMSGSLPMAGLPTTHHYGIKPEGLG 130 L EP LP + +T + K + G Sbjct: 109 LEEPSRVHLPFPWMKSTKAHAWKSQWAG 136 >sp|P32443|MEOX2_MOUSE Homeobox protein MOX-2 (Mesenchyme homeobox 2) Length = 303 Score = 239 (89.2 bits), Expect = 2.2e-20, P = 2.2e-20 Identities = 73/195 (37%), Positives = 93/195 (47%) Query: 80 YHHHYGHPQGPVGADTDGRYQSWLLEPMSGSLPMAGLPTTHHYGIKPEGLGTRADGALPG 139 +HHH+ H +W L MS S P A H ++P+ G G+ P Sbjct: 69 HHHHHHHHHHHQQQQHQALQSNWHLPQMS-SPPSAA---RHSLCLQPDSGGPPELGSSPP 124 Query: 140 ---SHTALLLSDYANGTVATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNPVSNW 196 S+++ L S G + LS DV + K D S S + N S Sbjct: 125 VLCSNSSSLGSSTPTGAACAPGDYGRQALS--PADVEKRSGSKRKSDSSDSQEGNYKSEV 182 Query: 197 LHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMK 256 S RK+R +TK QI ELE EF + YLTR RRYE+A L+LTERQVK+WFQNRRMK Sbjct: 183 --NSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMK 240 Query: 257 MK--KFNKDGAPKDE 269 K K + GA E Sbjct: 241 WKRVKGGQQGAAARE 255 >sp|P09080|HMB1_TRIGR Homeobox protein HB1 (TGHBOX1) Length = 307 Score = 211 (79.3 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20 Identities = 42/62 (67%), Positives = 50/62 (80%) Query: 204 KKRC--PYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFN 261 +KRC YT++Q LELEKEF FN YLTR RR E++ LL LTERQ+KIWFQNRRMK KK + Sbjct: 189 RKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKES 248 Query: 262 KD 263 K+ Sbjct: 249 KN 250 Score = 42 (19.8 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20 Identities = 12/36 (33%), Positives = 18/36 (50%) Query: 26 PRYPSGPGLQHARQSASISDHS--ELGTCTFPSKPP 59 P +P+ P HA + ++ EL +C F SK P Sbjct: 9 PFFPTYP---HAGEQFYVTPPGSYELSSCAFSSKNP 41 >sp|P14837|HM8_XENLA Homeobox protein 8 (XlHbox-8) Length = 271 Score = 204 (76.9 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20 Identities = 38/57 (66%), Positives = 47/57 (82%) Query: 203 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 259 ++ R YT+ Q+LELEKEFLFN Y++R RR E+A +LNLTER +KIWFQNRRMK KK Sbjct: 148 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK 204 Score = 48 (22.0 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20 Identities = 20/67 (29%), Positives = 25/67 (37%) Query: 29 PSGPG-LQHARQSASISDHSELGTCTFPSKPPVFGPSWSHVPAQFPGTVSSVYHHHYGH- 86 PS P L RQ + +S P PP P + P V ++HHHY H Sbjct: 30 PSPPACLYMGRQQQAA--YSNPLVALDPGSPPDISP-YEVPPISEEPIVPHLHHHHYHHH 86 Query: 87 ---PQGP 90 P P Sbjct: 87 HHHPGIP 93 Score = 38 (18.4 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19 Identities = 7/20 (35%), Positives = 9/20 (45%) Query: 32 PGLQHARQSASISDHSELGT 51 PG+ H D +E GT Sbjct: 90 PGIPHPHHQMPFPDDNESGT 109 >sp|Q1KKY0|HXB6A_FUGRU Homeobox protein Hox-B6a Length = 274 Score = 214 (80.4 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20 Identities = 45/75 (60%), Positives = 51/75 (68%) Query: 188 LQNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVK 247 +Q N S R+ R YT++Q LELEKEF FN YLTR RR E+A L LTERQ+K Sbjct: 175 MQRMNACNGTFGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 234 Query: 248 IWFQNRRMKMKKFNK 262 IWFQNRRMK KK NK Sbjct: 235 IWFQNRRMKWKKENK 249 Score = 37 (18.1 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20 Identities = 11/29 (37%), Positives = 12/29 (41%) Query: 130 GTRADGALPGSHTALLLSDYANGTVATAS 158 G RA G G T DYA A A+ Sbjct: 85 GHRAAGVGVGGTTGAGPCDYATAAAAAAA 113 >sp|Q91771|HXB7A_XENLA Homeobox protein Hox-B7 A (XlHbox-2 A) (MM3) Length = 220 Score = 235 (87.8 bits), Expect = 5.8e-20, P = 5.8e-20 Identities = 72/169 (42%), Positives = 90/169 (53%) Query: 109 GSLPMAGLPTTHHYGIKPEGLGTRADGALPGSHTALLLSDYANGTVAT---ASPVEKDTL 165 GS P P G GL + P S A+ S Y + SP E++ Sbjct: 44 GSSPGGTFPA----GSAAHGLYSNGSSLHPQS-PAMYPSSYGLDAASFNMHCSPFEQNLS 98 Query: 166 SGQ-AGDV----SGEAEEKPG-LDPSKSLQNNPVSNWLH-ASATRKK-RCPYTKHQILEL 217 S AGD S +AE++ L +L+ P W+ A A RK+ R YT++Q LEL Sbjct: 99 SLMCAGDPTKQNSAKAEQRESELHNEANLRIYP---WMRSAGADRKRGRQTYTRYQTLEL 155 Query: 218 EKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDGAP 266 EKEF FN YLTR RR E+A +L LTERQ+KIWFQNRRMK KK NK +P Sbjct: 156 EKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWKKENKASSP 204 >sp|P09024|HXB7_MOUSE Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B) Length = 217 Score = 235 (87.8 bits), Expect = 5.8e-20, P = 5.8e-20 Identities = 55/113 (48%), Positives = 71/113 (62%) Query: 158 SPVEKDTLSGQA-GDVSGEAEEKPGLDPSKSLQNN-PVSNWLHASATRKKRC--PYTKHQ 213 +P E++ LSG GD + A K D + ++N + W+ +S +KR YT++Q Sbjct: 90 APFEQN-LSGVCPGDPAKAAGAKEQRDS