Problem Sets
Perl Problems
Problem 1
- Adding numbers, printing text
Problem 2
- 'reverse' function and using hashes
Problem 3
- Regular expressions
Project 1
- parsing sequence data from files
Project 2
- finding codon bias
Bioperl Problems
Problem 4
- Using the Seq objects
Problem 5
- Sequence File I/O
Problem 6
- Sequence DB and Indexes
Problem 7
- NCBI data access
Problem 8
- Parsing/Running BLAST
Problem 9
- Running/Parsing MSA
Project 3
- building a local db of sequences from a blastdb
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